RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 PLEKHA7Q6IQ23 1121 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 ELMOD1Q8N336 334 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 NEDD1Q8NHV4 660 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 DOK1Q99704 481 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 MROQ9BYG7 248 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 RPF2Q9H7B2 306 aaKnown RBP19.17■□□□□ 0.66
RAB40C-206ENST00000561781 CNGB3Q9NQW8 809 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 DMAC2Q9NW81 257 aa19.17■□□□□ 0.66
RAB40C-206ENST00000561781 DENND3A2RUS2 1198 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 GOLGA8SH3BPF8 625 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 GOLGA8MH3BSY2 632 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 CELF2O95319 508 aaKnown RBP19.16■□□□□ 0.66
RAB40C-206ENST00000561781 SLC18A2Q05940 514 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 BST1Q10588 318 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 CST9Q5W186 159 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 CADM3Q8N126 398 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 SLC43A3Q8NBI5 491 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 VTI1AQ96AJ9 217 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 CMTM5Q96DZ9 223 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 ACSS3Q9H6R3 686 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 SACM1LQ9NTJ5 587 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 IQANK1A0A1B0GTG1 560 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 J3QRK9 145 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 TEX28O15482 410 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 CDK8P49336 464 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 PEX3P56589 373 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 ATP6V0D1P61421 351 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 KRT76Q01546 638 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 LSM12Q3MHD2 195 aaKnown RBP19.16■□□□□ 0.66
RAB40C-206ENST00000561781 FKBP1CQ5VVH2 108 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 KRT80Q6KB66 452 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 SETD3Q86TU7 594 aaPredicted RBP19.16■□□□□ 0.66
RAB40C-206ENST00000561781 FAM71AQ8IYT1 594 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 E2F7Q96AV8 911 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 FBXL8Q96CD0 374 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 WNK4Q96J92 1243 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 ANLNQ9NQW6 1124 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 DAPK2Q9UIK4 370 aa19.16■□□□□ 0.66
RAB40C-206ENST00000561781 A0A087WXM4 84 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 LOC105371267A0A1B0GV96 52 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 ARHGEF37A1IGU5 675 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 RGS13O14921 159 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 GDF11O95390 407 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 UBL4AP11441 157 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 GLRA2P23416 452 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 JAG1P78504 1218 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 SCARA3Q6AZY7 606 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 USP43Q70EL4 1123 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 CLEC10AQ8IUN9 316 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 SLFN12Q8IYM2 578 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 DCAKDQ8WVC6 231 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 CEP295NLQ96MC4 621 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 STN1Q9H668 368 aaKnown RBP19.15■□□□□ 0.66
RAB40C-206ENST00000561781 MOV10Q9HCE1 1003 aaKnown RBP19.15■□□□□ 0.66
RAB40C-206ENST00000561781 POU2F3Q9UKI9 436 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 H3BMQ9 156 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 FAM13AO94988 1023 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 KITP10721 976 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 ITGAXP20702 1163 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 ACADSBP45954 432 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 ADAM17P78536 824 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 Q3C1V9 767 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 AGAP7PQ5VUJ5 663 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 LMBRD2Q68DH5 695 aaPredicted RBP19.15■□□□□ 0.66
RAB40C-206ENST00000561781 PPP1R18Q6NYC8 613 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 CARM1Q86X55 608 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 SLC15A4Q8N697 577 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 SUN5Q8TC36 379 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 COG8Q96MW5 612 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 OSBPL11Q9BXB4 747 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 RIC8BQ9NVN3 520 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 DNPEPQ9ULA0 475 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 CDC14AQ9UNH5 594 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 ATP11BQ9Y2G3 1177 aa19.15■□□□□ 0.66
RAB40C-206ENST00000561781 PNMA6FA0A0J9YX94 578 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 USP17L15C9J2P7 530 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 USP17L13C9JLJ4 530 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 USP17L11C9JVI0 530 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 USP17L18D6R9N7 530 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 USP17L22D6RA61 530 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 USP17L17D6RBQ6 530 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 USP17L19D6RCP7 530 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 USP17L20D6RJB6 530 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 GAP43P17677 238 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 CTBSQ01459 385 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 PPP3CAQ08209 521 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 USP17L24Q0WX57 530 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 PPP1R2P3Q6NXS1 205 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 USP17L6PQ6QN14 398 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 DENND5BQ6ZUT9 1274 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 LYSMD3Q7Z3D4 306 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 ADAMTS16Q8TE57 1224 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 SERAC1Q96JX3 654 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 TMEM117Q9H0C3 514 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 JMJD4Q9H9V9 463 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 MARCOQ9UEW3 520 aaPredicted RBP19.14■□□□□ 0.66
RAB40C-206ENST00000561781 CPQQ9Y646 472 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 TLL2Q9Y6L7 1015 aa19.14■□□□□ 0.66
RAB40C-206ENST00000561781 ZNFX1Q9P2E3 1918 aaKnown RBP19.14■□□□□ 0.65
RAB40C-206ENST00000561781 SNAP91O60641 907 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms