RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CTDNEP1O95476 244 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 PLA2G4BP0C869 781 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 CD44P16070 742 aaKnown RBP10.04□□□□□ -0.8
HERC1-210ENST00000560897 CHKAP35790 457 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 ATP5C1P36542 298 aaKnown RBP10.04□□□□□ -0.8
HERC1-210ENST00000560897 SLC5A3P53794 718 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 NXPH1P58417 271 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 RPS14P62263 151 aaKnown RBP10.04□□□□□ -0.8
HERC1-210ENST00000560897 ZNF776Q68DI1 518 aaPredicted RBP10.04□□□□□ -0.8
HERC1-210ENST00000560897 TMC6Q7Z403 805 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 ZSCAN1Q8NBB4 408 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 OR6B3Q8NGW1 331 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 MAPK15Q8TD08 544 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 NOC3LQ8WTT2 800 aaKnown RBP10.04□□□□□ -0.8
HERC1-210ENST00000560897 KBTBD7Q8WVZ9 684 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 SORCS1Q8WY21 1168 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 GRAMD1AQ96CP6 724 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 HPDLQ96IR7 371 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 ANKRD36BP1Q96IX9 119 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 SERAC1Q96JX3 654 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 SLC46A1Q96NT5 459 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 FAM213AQ9BRX8 229 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 KLF16Q9BXK1 252 aaPredicted RBP10.04□□□□□ -0.8
HERC1-210ENST00000560897 ZNF518BQ9C0D4 1074 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 OSBPL2Q9H1P3 480 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 TLR8Q9NR97 1041 aaKnown RBP10.04□□□□□ -0.8
HERC1-210ENST00000560897 RBAKQ9NYW8 714 aaPredicted RBP10.04□□□□□ -0.8
HERC1-210ENST00000560897 ZNF510Q9Y2H8 683 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 RELNP78509 3460 aa10.04□□□□□ -0.8
HERC1-210ENST00000560897 TISP43B9A030 160 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 ANKRD63C9JTQ0 380 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 RNASEH1O60930 286 aaKnown RBP10.03□□□□□ -0.8
HERC1-210ENST00000560897 TBCAO75347 108 aaKnown RBP10.03□□□□□ -0.8
HERC1-210ENST00000560897 PENKP01210 267 aaPredicted RBP10.03□□□□□ -0.8
HERC1-210ENST00000560897 GP1BAP07359 652 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 ALPPL2P10696 532 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 FDPSP14324 419 aaKnown RBP10.03□□□□□ -0.8
HERC1-210ENST00000560897 GNL1P36915 607 aaPredicted RBP10.03□□□□□ -0.8
HERC1-210ENST00000560897 DUSP3P51452 185 aaPredicted RBP10.03□□□□□ -0.8
HERC1-210ENST00000560897 CACNA2D1P54289 1103 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 SLC12A3P55017 1021 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 SKOR1P84550 965 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 FOXK1P85037 733 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 NCAPHQ15003 741 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 NCEH1Q6PIU2 408 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 USP30Q70CQ3 517 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 BRSK2Q8IWQ3 736 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 KCTD17Q8N5Z5 321 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 SCAMP5Q8TAC9 235 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 PHF12Q96QT6 1004 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 REEP2Q9BRK0 252 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 MED10Q9BTT4 135 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 MTMR12Q9C0I1 747 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 EPN3Q9H201 632 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 FBXO44Q9H4M3 255 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 DMAP1Q9NPF5 467 aaPredicted RBP10.03□□□□□ -0.8
HERC1-210ENST00000560897 COMMD8Q9NX08 183 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 FBXL12Q9NXK8 326 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 TJP2Q9UDY2 1190 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 PLEKHB1Q9UF11 243 aaPredicted RBP10.03□□□□□ -0.8
HERC1-210ENST00000560897 TPX2Q9ULW0 747 aaKnown RBP10.03□□□□□ -0.8
HERC1-210ENST00000560897 SCML1Q9UN30 329 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 PCDHGA8Q9Y5G5 932 aa10.03□□□□□ -0.8
HERC1-210ENST00000560897 A0A1B0GVM2 712 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 A0A1W2PR77 199 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 CLEC18AA5D8T8 446 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 CLDN5O00501 218 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 TRIM38O00635 465 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 GREM1O60565 184 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 LDHAP00338 332 aaKnown RBP10.02□□□□□ -0.81
HERC1-210ENST00000560897 TNNC2P02585 160 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 ZDHHC11BP0C7U3 371 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 CKMT1AP12532 417 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 PTPN1P18031 435 aaKnown RBP10.02□□□□□ -0.81
HERC1-210ENST00000560897 MLLT3P42568 568 aaPredicted RBP10.02□□□□□ -0.81
HERC1-210ENST00000560897 PLA2G4AP47712 749 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 GTF2BQ00403 316 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 IGFBP7Q16270 282 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 ISXQ2M1V0 245 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 FYB2Q5VWT5 728 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 HIST2H2BCQ6DN03 193 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 CLEC18BQ6UXF7 455 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 CRELD2Q6UXH1 353 aaPredicted RBP10.02□□□□□ -0.81
HERC1-210ENST00000560897 DTHD1Q6ZMT9 781 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 TADA2BQ86TJ2 420 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 GPBP1Q86WP2 473 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 PTRH1Q86Y79 214 aaKnown RBP10.02□□□□□ -0.81
HERC1-210ENST00000560897 ZNF366Q8N895 744 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 CLEC18CQ8NCF0 446 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 OR2T34Q8NGX1 318 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 PLIN2Q99541 437 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 TM6SF1Q9BZW5 370 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 SUN2Q9UH99 717 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 STYXL1Q9Y6J8 313 aa10.02□□□□□ -0.81
HERC1-210ENST00000560897 A8MXQ7 604 aa10.01□□□□□ -0.81
HERC1-210ENST00000560897 CDRT15L2A8MXV6 281 aa10.01□□□□□ -0.81
HERC1-210ENST00000560897 FFAR2O15552 330 aa10.01□□□□□ -0.81
HERC1-210ENST00000560897 EFSO43281 561 aa10.01□□□□□ -0.81
HERC1-210ENST00000560897 PRPF6O94906 941 aaKnown RBP10.01□□□□□ -0.81
HERC1-210ENST00000560897 CLSTN1O94985 981 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms