RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 TRNP1Q6NT89 227 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 MMS22LQ6ZRQ5 1243 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 UNC45BQ8IWX7 931 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 RNF214Q8ND24 703 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 FAM122AQ96E09 287 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 SERPINB11Q96P15 392 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 XPO6Q96QU8 1125 aaKnown RBP12.57□□□□□ -0.4
USP8-212ENST00000560730 AGPAT1Q99943 283 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 SYT11Q9BT88 431 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 TRIM62Q9BVG3 475 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 ZDHHC4Q9NPG8 344 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 COX16Q9P0S2 106 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 CALCOCO1Q9P1Z2 691 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 MYO6Q9UM54 1294 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 SDK1Q7Z5N4 2213 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 TBC1D3BA6NDS4 549 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.56□□□□□ -0.4
USP8-212ENST00000560730 CHURC1-FNTBB4DL54 471 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 GJB6O95452 261 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 LATS1O95835 1130 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 MOCS2O96007 188 aaPredicted RBP12.56□□□□□ -0.4
USP8-212ENST00000560730 FERP16591 822 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 MMP8P22894 467 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 TNFRSF4P43489 277 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 NNTQ13423 1086 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 FAM102AQ5T9C2 384 aaPredicted RBP12.56□□□□□ -0.4
USP8-212ENST00000560730 NUGGCQ68CJ6 796 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 GRAMD4Q6IC98 578 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 TRIM72Q6ZMU5 477 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 ZDHHC17Q8IUH5 632 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 CCDC33Q8N5R6 958 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 TERB1Q8NA31 727 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 DDI1Q8WTU0 396 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 NELL1Q92832 810 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 C11orf70Q9BRQ4 267 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 XPO4Q9C0E2 1151 aaKnown RBP12.56□□□□□ -0.4
USP8-212ENST00000560730 IRF2BPLQ9H1B7 796 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 FAM204AQ9H8W3 233 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 SEPT11Q9NVA2 429 aaKnown RBP12.56□□□□□ -0.4
USP8-212ENST00000560730 DDIT4Q9NX09 232 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 TMEM59LQ9UK28 342 aa12.56□□□□□ -0.4
USP8-212ENST00000560730 PRRT4C9JH25 899 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 PAPSS2O95340 614 aaPredicted RBP12.55□□□□□ -0.4
USP8-212ENST00000560730 KLF8O95600 359 aaPredicted RBP12.55□□□□□ -0.4
USP8-212ENST00000560730 HOXD9P28356 352 aaPredicted RBP12.55□□□□□ -0.4
USP8-212ENST00000560730 NOS2P35228 1153 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 TIE1P35590 1138 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 FLT3P36888 993 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 SCNN1AP37088 669 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 NBL1P41271 181 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 MATKP42679 507 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 PXNP49023 591 aaPredicted RBP12.55□□□□□ -0.4
USP8-212ENST00000560730 SLC11A2P49281 568 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 DGKGP49619 791 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 CENPCQ03188 943 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 NME3Q13232 169 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 ASIC2Q16515 512 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 ZNF528Q3MIS6 628 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 MPPE1Q53F39 396 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 C10orf76Q5T2E6 689 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 PIK3R6Q5UE93 754 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 ALLCQ8N6M5 410 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 IL17RCQ8NAC3 791 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 AZIN2Q96A70 460 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 TMA16Q96EY4 203 aaKnown RBP12.55□□□□□ -0.4
USP8-212ENST00000560730 NPY6RQ99463 290 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 NUCKS1Q9H1E3 243 aaKnown RBP12.55□□□□□ -0.4
USP8-212ENST00000560730 TAS2R14Q9NYV8 317 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.4
USP8-212ENST00000560730 AIPL1Q9NZN9 384 aa12.55□□□□□ -0.4
USP8-212ENST00000560730 RIF1Q5UIP0 2472 aaKnown RBP12.55□□□□□ -0.4
USP8-212ENST00000560730 KCNU1A8MYU2 1149 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 M0QYT0 321 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 ATG13O75143 517 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 CYBBP04839 570 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 SKILP12757 684 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 HNRNPLP14866 589 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP8-212ENST00000560730 FNTBP49356 437 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 ZNF445P59923 1031 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 DMC1Q14565 340 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 RAB6CQ53S08 254 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 FIGNQ5HY92 759 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 SFMBT2Q5VUG0 894 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 HEATR6Q6AI08 1181 aaKnown RBP12.54□□□□□ -0.4
USP8-212ENST00000560730 ZNF571Q7Z3V5 609 aaPredicted RBP12.54□□□□□ -0.4
USP8-212ENST00000560730 DNAAF5Q86Y56 855 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 PHF13Q86YI8 300 aaPredicted RBP12.54□□□□□ -0.4
USP8-212ENST00000560730 EMC1Q8N766 993 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 MSANTD4Q8NCY6 345 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 WFDC5Q8TCV5 224 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 CPLX3Q8WVH0 158 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 NT5C3BQ969T7 300 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 PRICKLE1Q96MT3 831 aaPredicted RBP12.54□□□□□ -0.4
USP8-212ENST00000560730 TBCBQ99426 244 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 EDEM3Q9BZQ6 932 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 RAB6CQ9H0N0 254 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 HAUS4Q9H6D7 363 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 METTL5Q9NRN9 209 aaKnown RBP12.54□□□□□ -0.4
USP8-212ENST00000560730 PIGVQ9NUD9 493 aa12.54□□□□□ -0.4
USP8-212ENST00000560730 ZSCAN32Q9NX65 697 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms