RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ZNF189O75820 626 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-209ENST00000560463 ARHGEF15O94989 841 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 APOEP02649 317 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 C8AP07357 584 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 POU2F2P09086 479 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 HNRNPA1P09651 372 aaKnown RBP eCLIP8.92□□□□□ -0.98
TRAF3-209ENST00000560463 PFKLP17858 780 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 PGFP49763 221 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 TBX4P57082 545 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 COG7P83436 770 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 DR1Q01658 176 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 NRG1Q02297 640 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-209ENST00000560463 ADCY2Q08462 1091 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 EFEMP1Q12805 493 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 SEMA3BQ13214 749 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 BYSLQ13895 437 aaKnown RBP8.92□□□□□ -0.98
TRAF3-209ENST00000560463 ELF2Q15723 593 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 CA9Q16790 459 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 PPM1LQ5SGD2 360 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 PPP2R2DQ66LE6 453 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 NUGGCQ68CJ6 796 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 WDR93Q6P2C0 686 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 SYDE1Q6ZW31 735 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-209ENST00000560463 ANKS1BQ7Z6G8 1248 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 UNC45BQ8IWX7 931 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 CCDC105Q8IYK2 499 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 TDHQ8IZJ6 230 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 ATP6V0D2Q8N8Y2 350 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 LEMD2Q8NC56 503 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 KCTD15Q96SI1 283 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-209ENST00000560463 HERPUD2Q9BSE4 406 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 RAB17Q9H0T7 212 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 ANKZF1Q9H8Y5 726 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 GPATCH2LQ9NWQ4 482 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 CWC15Q9P013 229 aaKnown RBP8.92□□□□□ -0.98
TRAF3-209ENST00000560463 MARCH2Q9P0N8 246 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 OR12D3Q9UGF7 316 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.92□□□□□ -0.98
TRAF3-209ENST00000560463 SFMBT1Q9UHJ3 866 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 RASAL2Q9UJF2 1139 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 DNMT3LQ9UJW3 386 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 NR2E1Q9Y466 385 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 RAD54BQ9Y620 910 aa8.92□□□□□ -0.98
TRAF3-209ENST00000560463 V9GYY5 206 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-209ENST00000560463 H0YGN5 161 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 EEF2KO00418 725 aaKnown RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 APOL1O14791 398 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 FGF10O15520 208 aaPredicted RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 RAD51CO43502 376 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 LIASO43766 372 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 CLASP2O75122 1294 aaKnown RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 ZMYND10O75800 440 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 GAS8O95995 478 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 OAS1P00973 400 aaKnown RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 IGLV3-27P01718 113 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 F11P03951 625 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 ITGAVP06756 1048 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 RHOXF2BP0C7M4 288 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 SPATA31D3P0C874 917 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 ATXN8OSP0DMR3 200 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 GOT1P17174 413 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 PTPN2P17706 415 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 TNFRSF8P28908 595 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 CDC25CP30307 473 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 PBX2P40425 430 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 DRG2P55039 364 aaKnown RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 TPI1P60174 286 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 OTUD4Q01804 1114 aaKnown RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 MMRN1Q13201 1228 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 XRCC4Q13426 336 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 SPATA31D4Q6ZUB0 917 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 PDZD4Q76G19 769 aaPredicted RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 IFT20Q8IY31 132 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 PYROXD2Q8N2H3 581 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 EIF1ADQ8N9N8 165 aaKnown RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 PCDH19Q8TAB3 1148 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 SLC22A17Q8WUG5 538 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 C1orf54Q8WWF1 131 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 P3H4Q92791 437 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 NKD2Q969F2 451 aaPredicted RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 PPP2R3CQ969Q6 453 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 AZIN2Q96A70 460 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 PLD4Q96BZ4 506 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 BTN2A3PQ96KV6 586 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 FCRL2Q96LA5 508 aaPredicted RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 CSPG4P5Q96PW8 444 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 GCNAQ96QF7 691 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 CDCA3Q99618 268 aaPredicted RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 RHOXF2Q9BQY4 288 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 PARD6BQ9BYG5 372 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 NACA2Q9H009 215 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 NKX2-4Q9H2Z4 354 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 RETREG1Q9H6L5 497 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 CCSER2Q9H7U1 834 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 MAN1C1Q9NR34 630 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 ARGLU1Q9NWB6 273 aaPredicted RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 ZDHHC7Q9NXF8 308 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 DONSONQ9NYP3 566 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 AMACRQ9UHK6 382 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms