RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 HOXD12P35452 270 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 CPT1AP50416 773 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 GAD2Q05329 585 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 SLC29A2Q14542 456 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 ZNF267Q14586 743 aaPredicted RBP3.26□□□□□ -1.89
SPG11-222ENST00000560435 MZT2AQ6P582 158 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 SPSB3Q6PJ21 355 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 B3GNT9Q6UX72 402 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 FAM83HQ6ZRV2 1179 aaPredicted RBP3.26□□□□□ -1.89
SPG11-222ENST00000560435 DDIASQ8IXT1 998 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 ARL14EPQ8N8R7 260 aaPredicted RBP3.26□□□□□ -1.89
SPG11-222ENST00000560435 IL31RAQ8NI17 732 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 GJA10Q969M2 543 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 ELOVL1Q9BW60 279 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 AAMDCQ9H7C9 122 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 DKK4Q9UBT3 224 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 DOCK7Q96N67 2140 aa3.26□□□□□ -1.89
SPG11-222ENST00000560435 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 DENND3A2RUS2 1198 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 WDR47O94967 919 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 PPP1R3DO95685 299 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 CPA1P15085 419 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 NDUFS1P28331 727 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 SLC7A1P30825 629 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 DGKQP52824 942 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 EVA1CP58658 441 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 POU5F1BQ06416 359 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 Q0VFX4 171 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 MTAPQ13126 283 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 SF3B4Q15427 424 aaKnown RBP eCLIP3.25□□□□□ -1.89
SPG11-222ENST00000560435 IFIT1BQ5T764 474 aaKnown RBP3.25□□□□□ -1.89
SPG11-222ENST00000560435 C9orf57Q5W0N0 161 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 SWSAP1Q6NVH7 229 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 PARM1Q6UWI2 310 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 C7orf57Q8NEG2 295 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 AKAP1Q92667 903 aaKnown RBP eCLIP3.25□□□□□ -1.89
SPG11-222ENST00000560435 CHMP4CQ96CF2 233 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 ATP6V0A4Q9HBG4 840 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 ERVK-5Q9HDB9 667 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 UTS2RQ9UKP6 389 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 HDAC9Q9UKV0 1011 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 G3BP2Q9UN86 482 aaKnown RBP3.25□□□□□ -1.89
SPG11-222ENST00000560435 MMP24Q9Y5R2 645 aa3.25□□□□□ -1.89
SPG11-222ENST00000560435 EMSYQ7Z589 1322 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 OR6C75A6NL08 312 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 RAB27BO00194 218 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 WNT1P04628 370 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 SLC3A2P08195 630 aaKnown RBP3.24□□□□□ -1.89
SPG11-222ENST00000560435 AKR1A1P14550 325 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 TPH1P17752 444 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 PCYT1AP49585 367 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 ZNF84P51523 738 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 COASYQ13057 564 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 GAB1Q13480 694 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 AASDHQ4L235 1098 aaPredicted RBP3.24□□□□□ -1.89
SPG11-222ENST00000560435 LIPMQ5VYY2 423 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 ZBTB46Q86UZ6 589 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 FSTL5Q8N475 847 aaPredicted RBP3.24□□□□□ -1.89
SPG11-222ENST00000560435 ZFPM2Q8WW38 1151 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 NMD3Q96D46 503 aaKnown RBP3.24□□□□□ -1.89
SPG11-222ENST00000560435 URB1-AS1Q96HZ7 61 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 ZNF845Q96IR2 970 aaPredicted RBP3.24□□□□□ -1.89
SPG11-222ENST00000560435 CLMNQ96JQ2 1002 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 SELENOOQ9BVL4 669 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 STK31Q9BXU1 1019 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 ISCUQ9H1K1 167 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 PLAC1Q9HBJ0 212 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 STK32BQ9NY57 414 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 ANKRD6Q9Y2G4 727 aa3.24□□□□□ -1.89
SPG11-222ENST00000560435 GAGE12JA6NER3 117 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 INAFM1C9JVW0 142 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 MARCH6O60337 910 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 INMTO95050 263 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 SGPL1O95470 568 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 PF4V1P10720 104 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 AMPD3Q01432 767 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 KIF5AQ12840 1032 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 ZNF718Q3SXZ3 478 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 MANEALQ5VSG8 457 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.23□□□□□ -1.89
SPG11-222ENST00000560435 C16orf82Q7Z2V1 217 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 RHPN2Q8IUC4 686 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 MBD3L2Q8NHZ7 208 aaPredicted RBP3.23□□□□□ -1.89
SPG11-222ENST00000560435 SACM1LQ9NTJ5 587 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 PLEKHB1Q9UF11 243 aaPredicted RBP3.23□□□□□ -1.89
SPG11-222ENST00000560435 VPS4AQ9UN37 437 aa3.23□□□□□ -1.89
SPG11-222ENST00000560435 DPPA5A6NC42 116 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 SRRM3A6NNA2 597 aaPredicted RBP3.22□□□□□ -1.89
SPG11-222ENST00000560435 SPRY3O43610 288 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 KLKB1P03952 638 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 ENO1P06733 434 aaKnown RBP3.22□□□□□ -1.89
SPG11-222ENST00000560435 TXNP10599 105 aaKnown RBP3.22□□□□□ -1.89
SPG11-222ENST00000560435 MATN1P21941 496 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 HOXD3P31249 432 aaPredicted RBP3.22□□□□□ -1.89
SPG11-222ENST00000560435 CXCR3P49682 368 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 RASSF2P50749 326 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 SUMO3P55854 103 aaPredicted RBP3.22□□□□□ -1.89
SPG11-222ENST00000560435 DLX5P56178 289 aa3.22□□□□□ -1.89
SPG11-222ENST00000560435 POU3F1Q03052 451 aaPredicted RBP3.22□□□□□ -1.89
SPG11-222ENST00000560435 DMWDQ09019 674 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms