RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 OPRD1P41143 372 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 PTPN9P43378 593 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 SULT1E1P49888 294 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 RNASE9P60153 205 aaKnown RBP13.51□□□□□ -0.25
NEDD8-208ENST00000560427 MAPK8IP2Q13387 824 aaPredicted RBP13.51□□□□□ -0.25
NEDD8-208ENST00000560427 GAB4Q2WGN9 574 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 ANO4Q32M45 955 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 MPPE1Q53F39 396 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 BRMS1LQ5PSV4 323 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 MPP7Q5T2T1 576 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 BNIPLQ7Z465 357 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 TMEM25Q86YD3 366 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 ETFBKMTQ8IXQ9 262 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 TMEM105Q8N8V8 129 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 ATP6V0D2Q8N8Y2 350 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 ZNF557Q8N988 423 aaPredicted RBP13.51□□□□□ -0.25
NEDD8-208ENST00000560427 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.51□□□□□ -0.25
NEDD8-208ENST00000560427 BBS2Q9BXC9 721 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 ISCUQ9H1K1 167 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 KCNH6Q9H252 994 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 DLGAP2Q9P1A6 1054 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 ARHGAP20Q9P2F6 1191 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 ADAMTS1Q9UHI8 967 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 NDRG2Q9UN36 371 aaKnown RBP13.51□□□□□ -0.25
NEDD8-208ENST00000560427 SCINQ9Y6U3 715 aa13.51□□□□□ -0.25
NEDD8-208ENST00000560427 F5P12259 2224 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 TYW5A2RUC4 315 aaKnown RBP13.5□□□□□ -0.25
NEDD8-208ENST00000560427 C2CD4BA6NLJ0 364 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 KCNU1A8MYU2 1149 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 NEDD8-MDP1E9PL57 170 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 GFRA2O00451 464 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 FTLP02792 175 aaPredicted RBP13.5□□□□□ -0.25
NEDD8-208ENST00000560427 CHRNB1P11230 501 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 TYRP14679 529 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 CD72P21854 359 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 RRM1P23921 792 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 CXCR3P49682 368 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 VCPP55072 806 aaKnown RBP13.5□□□□□ -0.25
NEDD8-208ENST00000560427 CCINQ13939 588 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 PON2Q15165 354 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 PPP1R15BQ5SWA1 713 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 OTUD1Q5VV17 481 aaPredicted RBP13.5□□□□□ -0.25
NEDD8-208ENST00000560427 FYB2Q5VWT5 728 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 PLEKHA7Q6IQ23 1121 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 MAMSTRQ6ZN01 415 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 TPGS1Q6ZTW0 290 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 NUDT18Q6ZVK8 323 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 STRADAQ7RTN6 431 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 RNF34Q969K3 372 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 PNKPQ96T60 521 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 SLC2A11Q9BYW1 496 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 CHRDQ9H2X0 955 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 PARVAQ9NVD7 372 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 TAS2R14Q9NYV8 317 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 ZDBF2Q9HCK1 2354 aa13.5□□□□□ -0.25
NEDD8-208ENST00000560427 A0A0A0MRY4 1105 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 PI15O43692 258 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 TULP3O75386 442 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 ENDOD1O94919 500 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 APODP05090 189 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 PDGFRAP16234 1089 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 GPD1P21695 349 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 CDC25BP30305 580 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 GRIA2P42262 883 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 GALK1P51570 392 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 PITX1P78337 314 aaPredicted RBP13.49□□□□□ -0.25
NEDD8-208ENST00000560427 DEUP1Q05D60 604 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 NME3Q13232 169 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 FZD5Q13467 585 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 SLC18A3Q16572 532 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 FAM133BQ5BKY9 247 aaKnown RBP13.49□□□□□ -0.25
NEDD8-208ENST00000560427 ZC3H12AQ5D1E8 599 aaKnown RBP13.49□□□□□ -0.25
NEDD8-208ENST00000560427 RNF43Q68DV7 783 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 FSTL4Q6MZW2 842 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 TRNP1Q6NT89 227 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 WDR59Q6PJI9 974 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 HJURPQ8NCD3 748 aaPredicted RBP13.49□□□□□ -0.25
NEDD8-208ENST00000560427 RXFP2Q8WXD0 754 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 CFAP57Q96MR6 1250 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 TBCBQ99426 244 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 DEF6Q9H4E7 631 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 WDCPQ9H6R7 721 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 MRPL47Q9HD33 250 aaKnown RBP13.49□□□□□ -0.25
NEDD8-208ENST00000560427 PIGVQ9NUD9 493 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 ARHGEF38Q9NXL2 777 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 DEC1Q9P2X7 70 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 FBXO10Q9UK96 956 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 NENFQ9UMX5 172 aa13.49□□□□□ -0.25
NEDD8-208ENST00000560427 MTF2Q9Y483 593 aaPredicted RBP13.49□□□□□ -0.25
NEDD8-208ENST00000560427 KMT2EQ8IZD2 1858 aa13.48□□□□□ -0.25
NEDD8-208ENST00000560427 A0A087X0T9 212 aa13.48□□□□□ -0.25
NEDD8-208ENST00000560427 TMCO5BA8MYB1 307 aa13.48□□□□□ -0.25
NEDD8-208ENST00000560427 KAT7O95251 611 aa13.48□□□□□ -0.25
NEDD8-208ENST00000560427 MOCS2O96007 188 aaPredicted RBP13.48□□□□□ -0.25
NEDD8-208ENST00000560427 DCNP07585 359 aaKnown RBP13.48□□□□□ -0.25
NEDD8-208ENST00000560427 PLEKP08567 350 aaPredicted RBP13.48□□□□□ -0.25
NEDD8-208ENST00000560427 FAM228BP0C875 321 aa13.48□□□□□ -0.25
NEDD8-208ENST00000560427 RFC1P35251 1148 aaPredicted RBP13.48□□□□□ -0.25
NEDD8-208ENST00000560427 ZNF143P52747 638 aaPredicted RBP13.48□□□□□ -0.25
NEDD8-208ENST00000560427 ADKP55263 362 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms