RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 GSCP56915 257 aaPredicted RBP20.27■□□□□ 0.84
SHF-205ENST00000559566 GRSF1Q12849 480 aaKnown RBP eCLIP20.27■□□□□ 0.84
SHF-205ENST00000559566 TCF15Q12870 199 aa20.27■□□□□ 0.84
SHF-205ENST00000559566 MTAPQ13126 283 aa20.27■□□□□ 0.84
SHF-205ENST00000559566 NME3Q13232 169 aa20.27■□□□□ 0.84
SHF-205ENST00000559566 NUGGCQ68CJ6 796 aa20.27■□□□□ 0.84
SHF-205ENST00000559566 RFWD3Q6PCD5 774 aa20.27■□□□□ 0.84
SHF-205ENST00000559566 MCOLN2Q8IZK6 566 aa20.27■□□□□ 0.84
SHF-205ENST00000559566 MAML2Q8IZL2 1156 aaPredicted RBP20.27■□□□□ 0.84
SHF-205ENST00000559566 CFAP57Q96MR6 1250 aa20.27■□□□□ 0.84
SHF-205ENST00000559566 PRICKLE1Q96MT3 831 aaPredicted RBP20.27■□□□□ 0.84
SHF-205ENST00000559566 NUCKS1Q9H1E3 243 aaKnown RBP20.27■□□□□ 0.84
SHF-205ENST00000559566 PIGVQ9NUD9 493 aa20.27■□□□□ 0.84
SHF-205ENST00000559566 POLR3BQ9NW08 1133 aaPredicted RBP20.27■□□□□ 0.84
SHF-205ENST00000559566 ARHGAP20Q9P2F6 1191 aa20.27■□□□□ 0.84
SHF-205ENST00000559566 KCNU1A8MYU2 1149 aa20.26■□□□□ 0.83
SHF-205ENST00000559566 K7EQS6 105 aa20.26■□□□□ 0.83
SHF-205ENST00000559566 GALR2O43603 387 aaPredicted RBP20.26■□□□□ 0.83
SHF-205ENST00000559566 CACNG3O60359 315 aa20.26■□□□□ 0.83
SHF-205ENST00000559566 LATS1O95835 1130 aa20.26■□□□□ 0.83
SHF-205ENST00000559566 RRM1P23921 792 aa20.26■□□□□ 0.83
SHF-205ENST00000559566 AMPD2Q01433 879 aa20.26■□□□□ 0.83
SHF-205ENST00000559566 C1QBPQ07021 282 aaKnown RBP20.26■□□□□ 0.83
SHF-205ENST00000559566 TBX2Q13207 712 aaPredicted RBP20.26■□□□□ 0.83
SHF-205ENST00000559566 TDRD12Q587J7 1177 aaKnown RBP20.26■□□□□ 0.83
SHF-205ENST00000559566 WDR59Q6PJI9 974 aa20.26■□□□□ 0.83
SHF-205ENST00000559566 BNIPLQ7Z465 357 aa20.26■□□□□ 0.83
SHF-205ENST00000559566 UNC45BQ8IWX7 931 aa20.26■□□□□ 0.83
SHF-205ENST00000559566 IQCDQ96DY2 449 aa20.26■□□□□ 0.83
SHF-205ENST00000559566 TRIM5Q9C035 493 aa20.26■□□□□ 0.83
SHF-205ENST00000559566 NCAM2O15394 837 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 ATMINO43313 823 aaPredicted RBP20.25■□□□□ 0.83
SHF-205ENST00000559566 RNF40O75150 1001 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 CISD3P0C7P0 127 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 DRD1P21728 446 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 HNRNPH3P31942 346 aaKnown RBP20.25■□□□□ 0.83
SHF-205ENST00000559566 CHKAP35790 457 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 EIF2DP41214 584 aaKnown RBP20.25■□□□□ 0.83
SHF-205ENST00000559566 LRRC32Q14392 662 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 DGKKQ5KSL6 1271 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 ADGRF1Q5T601 910 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 SH3PXD2AQ5TCZ1 1133 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 TMC6Q7Z403 805 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 C3orf20Q8ND61 904 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 RXFP2Q8WXD0 754 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 AZIN2Q96A70 460 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 PNKPQ96T60 521 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 ARHGEF4Q9NR80 690 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 TMPRSS4Q9NRS4 437 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 DNAJC17Q9NVM6 304 aaKnown RBP20.25■□□□□ 0.83
SHF-205ENST00000559566 WDR35Q9P2L0 1181 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 FBXO10Q9UK96 956 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 HCN2Q9UL51 889 aa20.25■□□□□ 0.83
SHF-205ENST00000559566 MYOFQ9NZM1 2061 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 C2CD4BA6NLJ0 364 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 KAT7O95251 611 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 ADCY5O95622 1261 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 SERPING1P05155 500 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 CALB1P05937 261 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 HOXD9P28356 352 aaPredicted RBP20.24■□□□□ 0.83
SHF-205ENST00000559566 RFC1P35251 1148 aaPredicted RBP20.24■□□□□ 0.83
SHF-205ENST00000559566 GGCXP38435 758 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 ZNF75DP51815 510 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 ADKP55263 362 aaKnown RBP20.24■□□□□ 0.83
SHF-205ENST00000559566 ARID5BQ14865 1188 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 C15orf59Q2T9L4 293 aaPredicted RBP20.24■□□□□ 0.83
SHF-205ENST00000559566 SLC25A52Q3SY17 297 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 CCDC14Q49A88 953 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 PPP1R15BQ5SWA1 713 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 EMC10Q5UCC4 262 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 PIK3R6Q5UE93 754 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 ARCQ7LC44 396 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 DNAJC7Q99615 494 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 ZDHHC4Q9NPG8 344 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 SPATA6Q9NWH7 488 aaPredicted RBP20.24■□□□□ 0.83
SHF-205ENST00000559566 ADAMTS1Q9UHI8 967 aa20.24■□□□□ 0.83
SHF-205ENST00000559566 MIA3Q5JRA6 1907 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 WDFY4Q6ZS81 3184 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 MFAP3LO75121 409 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 APOEP02649 317 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 FTLP02792 175 aaPredicted RBP20.23■□□□□ 0.83
SHF-205ENST00000559566 MAGEA9P43362 315 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 SLC11A2P49281 568 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 CXCR3P49682 368 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 SEC13P55735 322 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 RPL7AP62424 266 aaKnown RBP20.23■□□□□ 0.83
SHF-205ENST00000559566 SATB1Q01826 763 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 OGDHQ02218 1023 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 TRIM14Q14142 442 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 RAP1GAP2Q684P5 730 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 C1orf210Q8IVY1 113 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 WFDC5Q8TCV5 224 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 DDI1Q8WTU0 396 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 PGAP3Q96FM1 320 aaPredicted RBP20.23■□□□□ 0.83
SHF-205ENST00000559566 PRMT1Q99873 361 aaKnown RBP20.23■□□□□ 0.83
SHF-205ENST00000559566 SELENOOQ9BVL4 669 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.23■□□□□ 0.83
SHF-205ENST00000559566 DEC1Q9P2X7 70 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 STAP1Q9ULZ2 295 aa20.23■□□□□ 0.83
SHF-205ENST00000559566 NENFQ9UMX5 172 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms