RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 RALGDSQ12967 914 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 NAPEPLDQ6IQ20 393 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 WDR93Q6P2C0 686 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 STK32CQ86UX6 486 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 LPCAT1Q8NF37 534 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 FAM120BQ96EK7 910 aaKnown RBP14.3□□□□□ -0.12
SPG11-210ENST00000558319 ABCG8Q9H221 673 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 SLC38A7Q9NVC3 462 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 PCDHGA4Q9Y5G9 962 aa14.3□□□□□ -0.12
SPG11-210ENST00000558319 C2orf81A6NN90 581 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 GJB6O95452 261 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 HK2P52789 917 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 YWHAZP63104 245 aaKnown RBP14.29□□□□□ -0.12
SPG11-210ENST00000558319 POU6F1Q14863 301 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 EID3Q8N140 333 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 KYQ8NBH2 561 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 NAALADL1Q9UQQ1 740 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 ADCY6O43306 1168 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 LGR5O75473 907 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 DCTN2Q13561 401 aaKnown RBP14.29□□□□□ -0.12
SPG11-210ENST00000558319 PKN2Q16513 984 aaKnown RBP14.29□□□□□ -0.12
SPG11-210ENST00000558319 ATAD3BQ5T9A4 648 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 LRRC49Q8IUZ0 686 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 FBXO25Q8TCJ0 367 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 SPPL2AQ8TCT8 520 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 MYOCQ99972 504 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 ZNF521Q96K83 1311 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 IDH3BO43837 385 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 PGM3O95394 542 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 PGBD2Q6P3X8 592 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 CYP4Z1Q86W10 505 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 FAM172AQ8WUF8 416 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 UBXN6Q9BZV1 441 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 CPA3P15088 417 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 PCSK1P29120 753 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 STIP1P31948 543 aaKnown RBP14.29□□□□□ -0.12
SPG11-210ENST00000558319 PKNOX1P55347 436 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 ELF3P78545 371 aaPredicted RBP14.29□□□□□ -0.12
SPG11-210ENST00000558319 BOP1Q14137 746 aaKnown RBP14.29□□□□□ -0.12
SPG11-210ENST00000558319 FAM98BQ52LJ0 330 aaKnown RBP14.29□□□□□ -0.12
SPG11-210ENST00000558319 NOL9Q5SY16 702 aaKnown RBP14.29□□□□□ -0.12
SPG11-210ENST00000558319 TMEM63BQ5T3F8 832 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 MAP1SQ66K74 1059 aaPredicted RBP14.29□□□□□ -0.12
SPG11-210ENST00000558319 BTN2A1Q7KYR7 527 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 ORC2Q13416 577 aaPredicted RBP14.29□□□□□ -0.12
SPG11-210ENST00000558319 C16orf46Q6P387 395 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 PALB2Q86YC2 1186 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 TMEM8AQ9HCN3 771 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 PCDHB2Q9Y5E7 798 aa14.29□□□□□ -0.12
SPG11-210ENST00000558319 MED24O75448 989 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 GHRP10912 638 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 ZNF37AP17032 561 aaPredicted RBP14.28□□□□□ -0.12
SPG11-210ENST00000558319 PSMA3P25788 255 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 ADSLP30566 484 aaPredicted RBP14.28□□□□□ -0.12
SPG11-210ENST00000558319 RGS2P41220 211 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 ZCCHC23Q6ZST2 131 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 DHFR2Q86XF0 187 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 SEMA4AQ9H3S1 761 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 WHRNQ9P202 907 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 MSH4O15457 936 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 PLA2G6O60733 806 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 FAM153BP0C7A2 387 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 ACOX1Q15067 660 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 KYAT1Q16773 422 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 FAM153CQ494X1 144 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 SH3BP4Q9P0V3 963 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 LIMD1Q9UGP4 676 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 UNC13AQ9UPW8 1703 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 A0A087WZ62 844 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 FCHO1O14526 889 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 IL18RAPO95256 599 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 STAG3L1P0CL83 205 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 KRT20P35900 424 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 RHOAP61586 193 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 RGS21Q2M5E4 152 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 C16orf86Q6ZW13 317 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 FDXACB1Q9BRP7 624 aaPredicted RBP14.28□□□□□ -0.12
SPG11-210ENST00000558319 OSGEPQ9NPF4 335 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 TUBGCP4Q9UGJ1 667 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 DMGDHQ9UI17 866 aaKnown RBP14.28□□□□□ -0.12
SPG11-210ENST00000558319 TUBE1Q9UJT0 475 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 SYNMO15061 1565 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 CEP170Q5SW79 1584 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 CXCL8P10145 99 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 CCR4P51679 360 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 OXCT1P55809 520 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 MRPS22P82650 360 aaKnown RBP14.28□□□□□ -0.12
SPG11-210ENST00000558319 NBPF12Q5TAG4 269 aaPredicted RBP14.28□□□□□ -0.12
SPG11-210ENST00000558319 SLC25A24Q6NUK1 477 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 DNAJC14Q6Y2X3 702 aaPredicted RBP14.28□□□□□ -0.12
SPG11-210ENST00000558319 SVOPQ8N4V2 548 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 ZNF483Q8TF39 744 aaPredicted RBP14.28□□□□□ -0.12
SPG11-210ENST00000558319 STK32AQ8WU08 396 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 OXNAD1Q96HP4 312 aaPredicted RBP14.28□□□□□ -0.12
SPG11-210ENST00000558319 CBWD1Q9BRT8 395 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 KANSL1LA0AUZ9 987 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 FAM86B1E9PN63 330 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 SLC2A4P14672 509 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 MAPKAPK2P49137 400 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 IFI35P80217 286 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms