RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CCDC14Q49A88 953 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 ATF7IP2Q5U623 682 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 ICA1LQ8NDH6 482 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 HIPK4Q8NE63 616 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 ZNF670Q9BS34 389 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 CYP3A43Q9HB55 503 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 PNPOQ9NVS9 261 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 ADAMTS5Q9UNA0 930 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 PDLIM1O00151 329 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 DPYSL4O14531 572 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 CREB3O43889 395 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 CXCL8P10145 99 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 P4HA1P13674 534 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 ETS2P15036 469 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 ALOX15P16050 662 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 NCF2P19878 526 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 ITGAXP20702 1163 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 PDE1CQ14123 709 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 MAP7Q14244 749 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 STEAP4Q687X5 459 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 MAVSQ7Z434 540 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 FBXW8Q8N3Y1 598 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 TTLL6Q8N841 843 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 C1orf127Q8N9H9 656 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 LRRN4Q8WUT4 740 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 KCNK16Q96T55 309 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 SNRNP25Q9BV90 132 aaKnown RBP12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 SHCBP1LQ9BZQ2 653 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 MAF1Q9H063 256 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 EPB41L1Q9H4G0 881 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 PTPRHQ9HD43 1115 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 XPNPEP3Q9NQH7 507 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 ARHGAP26Q9UNA1 814 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 ALDH1A2O94788 518 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 TOMM70O94826 608 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 SORBS2O94875 1100 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 ALDOAP04075 364 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 ITGB3P05106 788 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 UBA1P22314 1058 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 PRDX6P30041 224 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 GRIA2P42262 883 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 TBL3Q12788 808 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 SEMA5AQ13591 1074 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 GRAMD1BQ3KR37 738 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 PPP6R3Q5H9R7 873 aaPredicted RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 FSCBQ5H9T9 825 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 CASC4Q6P4E1 433 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 PACS1Q6VY07 963 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 SPATA24Q86W54 205 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 HPS6Q86YV9 775 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 C10orf107Q8IVU9 208 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 PIWIL1Q96J94 861 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 FAM167AQ96KS9 214 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 SORT1Q99523 831 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 IFT122Q9HBG6 1241 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 AS3MTQ9HBK9 375 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 MYOZ2Q9NPC6 264 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 LCTP09848 1927 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 COL4A5P29400 1685 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 BRWD3Q6RI45 1802 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 WDR27A2RRH5 827 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 ACKR2O00590 384 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 MDM4O15151 490 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 AP1G1O43747 822 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 GAS2O43903 313 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 FARP2O94887 1054 aaPredicted RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 NFICP08651 508 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 VAV1P15498 845 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 ZFXP17010 805 aaPredicted RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 ACAT1P24752 427 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 SDC4P31431 198 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 ATICP31939 592 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 GRIA1P42261 906 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 ABCE1P61221 599 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 FOLH1Q04609 750 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 NIPAL4Q0D2K0 466 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 NAB1Q13506 487 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 PRKG1Q13976 671 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 CA9Q16790 459 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 INSCQ1MX18 579 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 TCHHL1Q5QJ38 904 aaPredicted RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 POTEAQ6S8J7 498 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 TFB1MQ8WVM0 346 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 GBA2Q9HCG7 927 aaPredicted RBP12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 BTBD7Q9P203 1132 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 DTNAQ9Y4J8 743 aa12.17□□□□□ -0.46
VIPAS39-211ENST00000557658 LOC100653049A0A140TA62 436 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 ZNF487B1APH4 448 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 KRT34O76011 436 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 RALBP11234 206 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 MLNP12872 115 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 MX2P20592 715 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 CYP2F1P24903 491 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 HARS2P49590 506 aaKnown RBP12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 ITGA9Q13797 1035 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 EEF1DP3Q658K8 133 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 UGT2A3Q6UWM9 527 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 KBTBD6Q86V97 674 aa12.16□□□□□ -0.46
VIPAS39-211ENST00000557658 UNC5BQ8IZJ1 945 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms