RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 GRAMD4Q6IC98 578 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 RHBDF2Q6PJF5 856 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 LRSAM1Q6UWE0 723 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 BEND5Q7L4P6 421 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 DENND1CQ8IV53 801 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 SPEM1Q8N4L4 309 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 ATP6V0D2Q8N8Y2 350 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 ZNF557Q8N988 423 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-223ENST00000557511 RIN3Q8TB24 985 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 DDI1Q8WTU0 396 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 ACDQ96AP0 544 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 EDEM3Q9BZQ6 932 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 NUCKS1Q9H1E3 243 aaKnown RBP8.68□□□□□ -1.02
PSEN1-223ENST00000557511 CHRDQ9H2X0 955 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 FAM204AQ9H8W3 233 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 ARHGEF4Q9NR80 690 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 RRN3Q9NYV6 651 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 SFMBT1Q9UHJ3 866 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 AJAP1Q9UKB5 411 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-223ENST00000557511 FBXO4Q9UKT5 387 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 STAP1Q9ULZ2 295 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 MYO6Q9UM54 1294 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 SLC8A2Q9UPR5 921 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 MTF2Q9Y483 593 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-223ENST00000557511 PAXBP1Q9Y5B6 917 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 MYH10P35580 1976 aa8.68□□□□□ -1.02
PSEN1-223ENST00000557511 ANKRD62A6NC57 917 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 H0Y858 1186 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 TEX33O43247 280 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 HOXC11O43248 304 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-223ENST00000557511 PAPSS1O43252 624 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-223ENST00000557511 MMEP08473 750 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 TYRP14679 529 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 ABCB4P21439 1286 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 TNFAIP3P21580 790 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 GRIA2P42262 883 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 JAM2P57087 298 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 SLC6A3Q01959 620 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 RING1Q06587 406 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 NNTQ13423 1086 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 ASIC2Q16515 512 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 MPPE1Q53F39 396 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 DCAF6Q58WW2 860 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 FAM102AQ5T9C2 384 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-223ENST00000557511 SFMBT2Q5VUG0 894 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 NAA35Q5VZE5 725 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 SDE2Q6IQ49 451 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 MSANTD2Q6P1R3 559 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 TXNDC11Q6PKC3 985 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 TRMT11Q7Z4G4 463 aaKnown RBP8.67□□□□□ -1.02
PSEN1-223ENST00000557511 NOP9Q86U38 636 aaKnown RBP8.67□□□□□ -1.02
PSEN1-223ENST00000557511 VPS36Q86VN1 386 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 DEFB106AQ8N104 65 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 NAT16Q8N8M0 369 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 PRSS33Q8NF86 280 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 EPS8L1Q8TE68 723 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 DQX1Q8TE96 717 aaKnown RBP8.67□□□□□ -1.02
PSEN1-223ENST00000557511 CLEC4CQ8WTT0 213 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 UCMAQ8WVF2 138 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 ATRIPQ8WXE1 791 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 CHFRQ96EP1 664 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 CPXM1Q96SM3 734 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 ANP32EQ9BTT0 268 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 FAM126AQ9BYI3 521 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-223ENST00000557511 RBM12Q9NTZ6 932 aaKnown RBP8.67□□□□□ -1.02
PSEN1-223ENST00000557511 DNAJC17Q9NVM6 304 aaKnown RBP8.67□□□□□ -1.02
PSEN1-223ENST00000557511 TJP2Q9UDY2 1190 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 AGO1Q9UL18 857 aaKnown RBP8.67□□□□□ -1.02
PSEN1-223ENST00000557511 NAALADL1Q9UQQ1 740 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 TLR6Q9Y2C9 796 aa8.67□□□□□ -1.02
PSEN1-223ENST00000557511 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.67□□□□□ -1.02
PSEN1-223ENST00000557511 SYNJ2BP-COX16A0A087WUM0 186 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 OTOL1A6NHN0 477 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-223ENST00000557511 GOLGA8SH3BPF8 625 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 EPHB6O15197 1021 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 IRAK2O43187 625 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 MSI1O43347 362 aaKnown RBP8.66□□□□□ -1.02
PSEN1-223ENST00000557511 ACSL4O60488 711 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 TULP3O75386 442 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 KAT7O95251 611 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 MOCS2O96007 188 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-223ENST00000557511 F9P00740 461 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 EGFP01133 1207 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 CALB1P05937 261 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 CCR1P32246 355 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 CDH5P33151 784 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-223ENST00000557511 NOS2P35228 1153 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 SCNN1AP37088 669 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 TNFRSF4P43489 277 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 DGKGP49619 791 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 RNASE9P60153 205 aaKnown RBP8.66□□□□□ -1.02
PSEN1-223ENST00000557511 MRPS21P82921 87 aaKnown RBP8.66□□□□□ -1.02
PSEN1-223ENST00000557511 KDSRQ06136 332 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 MTAPQ13126 283 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 CCINQ13939 588 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 NR6A1Q15406 480 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 ADGRF1Q5T601 910 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 FSTL4Q6MZW2 842 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 DPY19L2P1Q6NXN4 242 aa8.66□□□□□ -1.02
PSEN1-223ENST00000557511 FAM183BPQ6ZVS7 135 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms