RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 GAD2Q05329 585 aa10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 ZNF543Q08ER8 600 aa10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 CRY1Q16526 586 aa10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 ZNF829Q3KNS6 432 aaPredicted RBP10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 PPIL6Q8IXY8 311 aa10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 RDH13Q8NBN7 331 aa10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 CHPT1Q8WUD6 406 aa10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 TMIGD2Q96BF3 282 aa10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 CCDC124Q96CT7 223 aaKnown RBP10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 FAM20AQ96MK3 541 aa10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 C20orf27Q9GZN8 174 aa10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 ZNF395Q9H8N7 513 aaPredicted RBP10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 DKK3Q9UBP4 350 aa10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 BCS1LQ9Y276 419 aa10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 GPC6Q9Y625 555 aaPredicted RBP10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 RBBP6Q7Z6E9 1792 aaKnown RBP10.8□□□□□ -0.68
SUPT16H-207ENST00000557394 TFPTP0C1Z6 253 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 OCM2P0CE71 109 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 OCMP0CE72 109 aaPredicted RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 CD58P19256 250 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 HMOX2P30519 316 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 MASP1P48740 699 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 TMED10P49755 219 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 TUBA4AP68366 448 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 GRAPQ13588 217 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 CHI3L2Q15782 390 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 TCHHL1Q5QJ38 904 aaPredicted RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 C6orf52Q5T4I8 152 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 DEPDC1Q5TB30 811 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 ANKRD22Q5VYY1 191 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 NIPAL1Q6NVV3 410 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 DENND5BQ6ZUT9 1274 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 CEP68Q76N32 757 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 TRIM50Q86XT4 487 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 RHPN2Q8IUC4 686 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 CHERPQ8IWX8 916 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 FAM178BQ8IXR5 827 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 C12orf56Q8IXR9 622 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 RCOR2Q8IZ40 523 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 HIPK4Q8NE63 616 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 GRAPLQ8TC17 118 aaPredicted RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 JPH3Q8WXH2 748 aaPredicted RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 CPT1BQ92523 772 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 CASP10Q92851 521 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 CELF1Q92879 486 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 KCNK16Q96T55 309 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 EIF2AK1Q9BQI3 630 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 HEPHQ9BQS7 1158 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 VPS45Q9NRW7 570 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 NDFIP2Q9NV92 336 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 CNOT11Q9UKZ1 510 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 DOLKQ9UPQ8 538 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 A0A1B0GTW7 788 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 PRRT4C9JH25 899 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 GOLGA8SH3BPF8 625 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 GOLGA8MH3BSY2 632 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 ZBTB5O15062 677 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 XPOTO43592 962 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 INHBBP09529 407 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 KITP10721 976 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 CIITAP33076 1130 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 PTPN7P35236 360 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 RPS3AP61247 264 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 MRPS5P82675 430 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 TXNL4AP83876 142 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 CYP4A11Q02928 519 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 ZFP1Q6P2D0 407 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 GRAMD2AQ8IUY3 354 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 DEFB107AQ8IZN7 70 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 SLITRK1Q96PX8 696 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 CSRNP1Q96S65 589 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 TRPC7Q9HCX4 862 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 MTMR4Q9NYA4 1195 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 MARCOQ9UEW3 520 aaPredicted RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 HERC5Q9UII4 1024 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 RNF11Q9Y3C5 154 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 LRRC37AA6NMS7 1700 aa10.79□□□□□ -0.68
SUPT16H-207ENST00000557394 USP17L15C9J2P7 530 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 USP17L13C9JLJ4 530 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 USP17L11C9JVI0 530 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 USP17L18D6R9N7 530 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 USP17L22D6RA61 530 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 USP17L17D6RBQ6 530 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 USP17L19D6RCP7 530 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 USP17L20D6RJB6 530 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 H0YJX3 145 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 GOLGA8TH3BQL2 631 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 MGEA5O60502 916 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 SIN3BO75182 1162 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 ARIH2O95376 493 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 MYL4P12829 197 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 RAC2P15153 192 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 S100A1P23297 94 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 USP17L24Q0WX57 530 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 AP3B2Q13367 1082 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 ZYXQ15942 572 aaKnown RBP10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 PRR16Q569H4 304 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 USP17L6PQ6QN14 398 aa10.78□□□□□ -0.68
SUPT16H-207ENST00000557394 ARCQ7LC44 396 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms