RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 DPEP3Q9H4B8 488 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
PSEN1-220ENST00000557037 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.18□□□□□ -0.3
PSEN1-220ENST00000557037 A0A1B0GVM2 712 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 MDM4O15151 490 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 JAK2O60674 1132 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 PENKP01210 267 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-220ENST00000557037 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-220ENST00000557037 ZDHHC11BP0C7U3 371 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 PTPN1P18031 435 aaKnown RBP13.17□□□□□ -0.3
PSEN1-220ENST00000557037 WARSP23381 471 aaKnown RBP13.17□□□□□ -0.3
PSEN1-220ENST00000557037 GNL1P36915 607 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-220ENST00000557037 AFMP43652 599 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 GALCP54803 685 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 FOXK1P85037 733 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 SRSF6Q13247 344 aaKnown RBP13.17□□□□□ -0.3
PSEN1-220ENST00000557037 ZNF211Q13398 564 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-220ENST00000557037 KCNJ12Q14500 433 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 TTC31Q49AM3 519 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-220ENST00000557037 DPH6Q7L8W6 267 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 SPATS2Q86XZ4 545 aaKnown RBP13.17□□□□□ -0.3
PSEN1-220ENST00000557037 CYB5D2Q8WUJ1 264 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 SAAL1Q96ER3 474 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 SGF29Q96ES7 293 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 ATXN7L3BQ96GX2 97 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 MTMR12Q9C0I1 747 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 SNX25Q9H3E2 840 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
PSEN1-220ENST00000557037 FFAR2O15552 330 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 CYP26A1O43174 497 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 PPFIA2O75334 1257 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 GJB6O95452 261 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 ITGB2P05107 769 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 SFTPCP11686 197 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 SLC5A3P53794 718 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 POU5F1Q01860 360 aaKnown RBP13.16□□□□□ -0.3
PSEN1-220ENST00000557037 GOLGA8FQ08AF8 430 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 GOLGA8DPQ0D2H9 430 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 DHX8Q14562 1220 aaKnown RBP13.16□□□□□ -0.3
PSEN1-220ENST00000557037 ISXQ2M1V0 245 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 FYB2Q5VWT5 728 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 Q6ZNB5 142 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 CCDC83Q8IWF9 413 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 BRSK2Q8IWQ3 736 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 OR6B3Q8NGW1 331 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 NOC3LQ8WTT2 800 aaKnown RBP13.16□□□□□ -0.3
PSEN1-220ENST00000557037 SERAC1Q96JX3 654 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 SEMA3CQ99985 751 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 ABCG4Q9H172 646 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 PRSS16Q9NQE7 514 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 KCND2Q9NZV8 630 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 PLEKHB1Q9UF11 243 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-220ENST00000557037 SERGEFQ9UGK8 458 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 NUDT5Q9UKK9 219 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 NCKAP1Q9Y2A7 1128 aa13.16□□□□□ -0.3
PSEN1-220ENST00000557037 R3HCC1Q9Y3T6 440 aaKnown RBP13.16□□□□□ -0.3
PSEN1-220ENST00000557037 GOLGA8IPA6NC78 632 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 GOLGA8JA6NMD2 632 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 INHBCP55103 352 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 ASIC1P78348 528 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 GTF2BQ00403 316 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 ZBTB16Q05516 673 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 EIF4HQ15056 248 aaKnown RBP13.15□□□□□ -0.3
PSEN1-220ENST00000557037 E2F5Q15329 346 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 TBR1Q16650 682 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 IGF2-ASQ6U949 168 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 GPBP1Q86WP2 473 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 SLC25A45Q8N413 288 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 OXR1Q8N573 874 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 GTF3C6Q969F1 213 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 PRR11Q96HE9 360 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-220ENST00000557037 SLC25A18Q9H1K4 315 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 MTG2Q9H4K7 406 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 ERVMER34-1Q9H9K5 563 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 PARVGQ9HBI0 331 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 PDE11AQ9HCR9 933 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 FBXL12Q9NXK8 326 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 RBAKQ9NYW8 714 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-220ENST00000557037 IL37Q9NZH6 218 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 ODF2LQ9ULJ1 636 aa13.15□□□□□ -0.3
PSEN1-220ENST00000557037 ATXN7L1Q9ULK2 861 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-220ENST00000557037 TDRD6O60522 2096 aaKnown RBP13.14□□□□□ -0.31
PSEN1-220ENST00000557037 CDRT15L2A8MXV6 281 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 TNFSF15O95150 251 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 TMEM191BP0C7N4 346 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 POU3F2P20265 443 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-220ENST00000557037 SCP2P22307 547 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 ATP5C1P36542 298 aaKnown RBP13.14□□□□□ -0.31
PSEN1-220ENST00000557037 DUSP3P51452 185 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-220ENST00000557037 SLC45A4Q5BKX6 768 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 ZNF776Q68DI1 518 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-220ENST00000557037 MAPK15Q8TD08 544 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 FIZ1Q96SL8 496 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 MED10Q9BTT4 135 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 TM6SF1Q9BZW5 370 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 TMEM245Q9H330 911 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 PABPC3Q9H361 631 aaKnown RBP13.14□□□□□ -0.31
PSEN1-220ENST00000557037 CAAP1Q9H8G2 361 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 UCKL1Q9NWZ5 548 aa13.14□□□□□ -0.31
PSEN1-220ENST00000557037 ZFC3H1O60293 1989 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms