RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 ACADSBP45954 432 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 SNX16P57768 344 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 EXOC3L4Q17RC7 722 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 RSPO4Q2I0M5 234 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 KBTBD6Q86V97 674 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 DENND1CQ8IV53 801 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 CCDC117Q8IWD4 279 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 UNC45BQ8IWX7 931 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 ETFBKMTQ8IXQ9 262 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 RBBP8NLQ8NC74 664 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 DDI1Q8WTU0 396 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 UCMAQ8WVF2 138 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 IRGQQ8WZA9 623 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 EZH1Q92800 747 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 FOXJ1Q92949 421 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 PLD4Q96BZ4 506 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 RMDN1Q96DB5 314 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 ZC3H10Q96K80 434 aaKnown RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 CNOT6LQ96LI5 555 aaKnown RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 GBP4Q96PP9 640 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 INTS2Q9H0H0 1204 aaKnown RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 ARRDC1-AS1Q9H2J1 176 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 MARK1Q9P0L2 795 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 STARD13Q9Y3M8 1113 aa7.66□□□□□ -1.18
SCFD1-222ENST00000556768 HBS1LQ9Y450 684 aaKnown RBP7.66□□□□□ -1.18
SCFD1-222ENST00000556768 COL4A3Q01955 1670 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-222ENST00000556768 TYW5A2RUC4 315 aaKnown RBP7.65□□□□□ -1.18
SCFD1-222ENST00000556768 CAPN9O14815 690 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 TIMM44O43615 452 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 TPM2P07951 284 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 KIR2DL1P43626 348 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-222ENST00000556768 SLC11A2P49281 568 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 STARD3Q14849 445 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 GAB4Q2WGN9 574 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 AASDHQ4L235 1098 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-222ENST00000556768 MPPE1Q53F39 396 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 EMC10Q5UCC4 262 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 IL31Q6EBC2 164 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 C12orf40Q86WS4 652 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 FMNL3Q8IVF7 1028 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 SCML4Q8N228 414 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 ZNF557Q8N988 423 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-222ENST00000556768 NETO1Q8TDF5 533 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 SLC35F5Q8WV83 523 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 HMGB4Q8WW32 186 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 DDX1Q92499 740 aaKnown RBP7.65□□□□□ -1.18
SCFD1-222ENST00000556768 BAP1Q92560 729 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 NOX5Q96PH1 765 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 MED15Q96RN5 788 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 DDX50Q9BQ39 737 aaKnown RBP7.65□□□□□ -1.18
SCFD1-222ENST00000556768 C1QTNF2Q9BXJ5 285 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 NUP62CLQ9H1M0 184 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 PLK2Q9NYY3 685 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 AGO1Q9UL18 857 aaKnown RBP7.65□□□□□ -1.18
SCFD1-222ENST00000556768 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.65□□□□□ -1.18
SCFD1-222ENST00000556768 PLA2G4CQ9UP65 541 aa7.65□□□□□ -1.18
SCFD1-222ENST00000556768 TCRBV21S2A2A0A5A6 115 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 GTPBP10A4D1E9 387 aaKnown RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 YJEFN3A6XGL0 299 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 E7ENQ6 273 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 SGK1O00141 431 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 TULP2O00295 520 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 SYNCRIPO60506 623 aaKnown RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 GREM1O60565 184 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 ZNF217O75362 1048 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 LETM1O95202 739 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 ZNF806P0C7X5 589 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 HOXB2P14652 356 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 BRD2P25440 801 aaKnown RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 RGS7P49802 495 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 ZNF132P52740 706 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 CREB5Q02930 508 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 AGERQ15109 404 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 PLK5Q496M5 336 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 CT47A1Q5JQC4 288 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 ADGRF1Q5T601 910 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 NUGGCQ68CJ6 796 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 PMF1Q6P1K2 205 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 Q6ZNB5 142 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 PRR23CQ6ZRP0 262 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 LPCAT2Q7L5N7 544 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 LMO3Q8TAP4 145 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 EDEM1Q92611 657 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 FAM149B1Q96BN6 582 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 TMA16Q96EY4 203 aaKnown RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 RTKNQ9BST9 563 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 CRACR2AQ9BSW2 395 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 SLC2A11Q9BYW1 496 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 TPSD1Q9BZJ3 242 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 MIS12Q9H081 205 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 CLSTN2Q9H4D0 955 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 THAP9Q9H5L6 903 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 VPS45Q9NRW7 570 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 ZNF358Q9NW07 568 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 POLR3BQ9NW08 1133 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 DLL3Q9NYJ7 618 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 APEX2Q9UBZ4 518 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 CEP83Q9Y592 693 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms