RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ST7Q9NRC1 585 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 SEMA4GQ9NTN9 838 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 DLL3Q9NYJ7 618 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 TAB2Q9NYJ8 693 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 USP18Q9UMW8 372 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 NAALADL1Q9UQQ1 740 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 INVSQ9Y283 1065 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 MYO18AQ92614 2054 aaKnown RBP10.76□□□□□ -0.69
SHMT2-224ENST00000556737 NYNRINQ9P2P1 1898 aaKnown RBP10.76□□□□□ -0.69
SHMT2-224ENST00000556737 IRAK2O43187 625 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 SART1O43290 800 aaKnown RBP10.75□□□□□ -0.69
SHMT2-224ENST00000556737 TSPAN3O60637 253 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 CAVIN2O95810 425 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 CYBBP04839 570 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 NCAM1P13591 858 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 NTSR1P30989 418 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 SLC6A4P31645 630 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 USP8P40818 1118 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 HARS2P49590 506 aaKnown RBP10.75□□□□□ -0.69
SHMT2-224ENST00000556737 TBX4P57082 545 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 TPM4P67936 248 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 PITX1P78337 314 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-224ENST00000556737 LMNB2Q03252 620 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 EIF4EBP2Q13542 120 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-224ENST00000556737 ENPP2Q13822 863 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 TAF5Q15542 800 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 CSRP2Q16527 193 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 MAP7D1Q3KQU3 841 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 PTPN20Q4JDL3 420 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 MPPE1Q53F39 396 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 PLA2G2CQ5R387 149 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 KLHDC7AQ5VTJ3 777 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 SYPL2Q5VXT5 272 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 NUGGCQ68CJ6 796 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 PMS2CLQ68D20 193 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 KIAA1211LQ6NV74 962 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 PRR23CQ6ZRP0 262 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 ANKS1BQ7Z6G8 1248 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 AOPEPQ8N6M6 819 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 FRMD1Q8N878 549 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 C1orf131Q8NDD1 294 aaKnown RBP10.75□□□□□ -0.69
SHMT2-224ENST00000556737 WFDC5Q8TCV5 224 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 HMGB4Q8WW32 186 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 FAM149B1Q96BN6 582 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 SERPINB11Q96P15 392 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 SLC2A13Q96QE2 648 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 LSM14BQ9BX40 385 aaKnown RBP10.75□□□□□ -0.69
SHMT2-224ENST00000556737 ARRDC1-AS1Q9H2J1 176 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 GRPEL1Q9HAV7 217 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 CBX8Q9HC52 389 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 CACNA2D2Q9NY47 1150 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 MBD1Q9UIS9 605 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-224ENST00000556737 RAD54BQ9Y620 910 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 RALGAPA1Q6GYQ0 2036 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 LAMA1P25391 3075 aa10.75□□□□□ -0.69
SHMT2-224ENST00000556737 NUP205Q92621 2012 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 GOLGA6L7A0A1B0GV03 622 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 SMTNL1A8MU46 457 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 EPHB6O15197 1021 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 ACSL4O60488 711 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 ALDH1A2O94788 518 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 ERBB2P04626 1255 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 UCHL3P15374 230 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 NDUFV2P19404 249 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 HLA-FP30511 346 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 MPLP40238 635 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 IL12RB1P42701 662 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 KLK7P49862 253 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 DRAP1Q14919 205 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-224ENST00000556737 KRT31Q15323 416 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 SF3A2Q15428 464 aaKnown RBP10.74□□□□□ -0.69
SHMT2-224ENST00000556737 CCDC6Q16204 474 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 RSPO4Q2I0M5 234 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-224ENST00000556737 USP39Q53GS9 565 aaKnown RBP10.74□□□□□ -0.69
SHMT2-224ENST00000556737 ADGRF1Q5T601 910 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 OTUD1Q5VV17 481 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-224ENST00000556737 RFWD3Q6PCD5 774 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 OLFML1Q6UWY5 402 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 NUDT18Q6ZVK8 323 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 FAM183BPQ6ZVS7 135 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 KIAA0907Q7Z7F0 614 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-224ENST00000556737 CHPFQ8IZ52 775 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.74□□□□□ -0.69
SHMT2-224ENST00000556737 ADAM32Q8TC27 787 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 IPO4Q8TEX9 1081 aaKnown RBP10.74□□□□□ -0.69
SHMT2-224ENST00000556737 DDI1Q8WTU0 396 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 RLN3Q8WXF3 142 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 DDX1Q92499 740 aaKnown RBP10.74□□□□□ -0.69
SHMT2-224ENST00000556737 ANP32BQ92688 251 aaKnown RBP10.74□□□□□ -0.69
SHMT2-224ENST00000556737 GOLGA1Q92805 767 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 AZIN2Q96A70 460 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 SLC2A11Q9BYW1 496 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 LHX5Q9H2C1 402 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 HSD3B7Q9H2F3 369 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 SMOC1Q9H4F8 434 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 POPDC2Q9HBU9 364 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 CD93Q9NPY3 652 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 PLCB1Q9NQ66 1216 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 CALCOCO1Q9P1Z2 691 aa10.74□□□□□ -0.69
SHMT2-224ENST00000556737 THAP10Q9P2Z0 257 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms