RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 PENKP01210 267 aaPredicted RBP25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 CYBBP04839 570 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 SERPING1P05155 500 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 SLC2A3P11169 496 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 GZMAP12544 262 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 COL9A1P20849 921 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 FBXO43Q4G163 708 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 TDRD12Q587J7 1177 aaKnown RBP25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 OTUD1Q5VV17 481 aaPredicted RBP25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 FYB2Q5VWT5 728 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 TRNP1Q6NT89 227 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 MCOLN2Q8IZK6 566 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 EZH1Q92800 747 aaPredicted RBP25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 BHMTQ93088 406 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 P2RY11Q96G91 374 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 PLK2Q9NYY3 685 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 DEC1Q9P2X7 70 aa25.53■■□□□ 1.68
SDR39U1-221ENST00000556707 SYNJ2BP-COX16A0A087WUM0 186 aa25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 APODP05090 189 aa25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 HNRNPH3P31942 346 aaKnown RBP25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 MESP2Q0VG99 397 aa25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 SLC25A52Q3SY17 297 aa25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 PREPLQ4J6C6 727 aaPredicted RBP25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 FAM133BQ5BKY9 247 aaKnown RBP25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 PHTF2Q8N3S3 785 aa25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 C3orf20Q8ND61 904 aa25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 PGAP3Q96FM1 320 aaPredicted RBP25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 VCPIP1Q96JH7 1222 aa25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 BTN2A3PQ96KV6 586 aa25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 ADAM33Q9BZ11 813 aa25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 ARHGEF4Q9NR80 690 aa25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 DNAJC17Q9NVM6 304 aaKnown RBP25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 SPATA6Q9NWH7 488 aaPredicted RBP25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 COX16Q9P0S2 106 aa25.52■■□□□ 1.68
SDR39U1-221ENST00000556707 TMCO5BA8MYB1 307 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 KCNU1A8MYU2 1149 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 KAT7O95251 611 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 MOCS2O96007 188 aaPredicted RBP25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 TPM1P09493 284 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 TFE3P19532 575 aaPredicted RBP25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 CCR1P32246 355 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 GRIA2P42262 883 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 SULT1E1P49888 294 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 KDSRQ06136 332 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 MTAPQ13126 283 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 NME3Q13232 169 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 GAS6Q14393 721 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 PPP2R5DQ14738 602 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 MPPE1Q53F39 396 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 NADSYN1Q6IA69 706 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 Q6ZS52 159 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 C1orf210Q8IVY1 113 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 ATP6V0D2Q8N8Y2 350 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 RNF34Q969K3 372 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 DDX50Q9BQ39 737 aaKnown RBP25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 IRX2Q9BZI1 471 aaPredicted RBP25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 TMEM51Q9NW97 253 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 CALCOCO1Q9P1Z2 691 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 SLC12A6Q9UHW9 1150 aa25.51■■□□□ 1.67
SDR39U1-221ENST00000556707 A0A0A0MRY4 1105 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 GOLGA6L7A0A1B0GV03 622 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 TSPAN3O60637 253 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 F9P00740 461 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 KRT3P12035 628 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 SLC6A4P31645 630 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 GRAMD4Q6IC98 578 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 RFWD3Q6PCD5 774 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 MAMSTRQ6ZN01 415 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 VPS36Q86VN1 386 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 EMC1Q8N766 993 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 PRSS33Q8NF86 280 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 OR8K1Q8NGG5 319 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 DDI1Q8WTU0 396 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 TMA16Q96EY4 203 aaKnown RBP25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 TBCBQ99426 244 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 DNAJC7Q99615 494 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 SELENOOQ9BVL4 669 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 PIGVQ9NUD9 493 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 XPO7Q9UIA9 1087 aaKnown RBP25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 FBXO10Q9UK96 956 aa25.5■■□□□ 1.67
SDR39U1-221ENST00000556707 TCRBV5S1A1TA0A578 114 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 C2CD4BA6NLJ0 364 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 SIGLEC16A6NMB1 481 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 K7EQS6 105 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 RNF40O75150 1001 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 RTN2O75298 545 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 GJB6O95452 261 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 PLEKP08567 350 aaPredicted RBP25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 ABCB4P21439 1286 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 DEUP1Q05D60 604 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 ARID5BQ14865 1188 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 PIK3R6Q5UE93 754 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 DNAJC24Q6P3W2 148 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 DRC7Q8IY82 874 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 SPEM1Q8N4L4 309 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 CCDC26Q8TAB7 109 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 JOSD2Q8TAC2 188 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 RXFP2Q8WXD0 754 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 CFAP57Q96MR6 1250 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms