RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.94□□□□□ -0.34
SHMT2-221ENST00000555773 CFAP97Q9P2B7 532 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 TBC1D14Q9P2M4 693 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 PCSK1NQ9UHG2 260 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 STOML2Q9UJZ1 356 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 AMFRQ9UKV5 643 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 CCL26Q9Y258 94 aa12.94□□□□□ -0.34
SHMT2-221ENST00000555773 NOTCH4Q99466 2003 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 MIF4GDA9UHW6 222 aaKnown RBP12.93□□□□□ -0.34
SHMT2-221ENST00000555773 ANHXE9PGG2 379 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 GREM1O60565 184 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 KLKB1P03952 638 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 CORO1AP31146 461 aaKnown RBP12.93□□□□□ -0.34
SHMT2-221ENST00000555773 VIPR2P41587 438 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 MLLT6P55198 1093 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-221ENST00000555773 ZNF77Q15935 545 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 RAB6CQ53S08 254 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 ADGRF1Q5T601 910 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 TANGO2Q6ICL3 276 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 Q6ZNB5 142 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 PEX26Q7Z412 305 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 NT5DC3Q86UY8 548 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 ZSCAN30Q86W11 494 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 MFSD6LQ8IWD5 586 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 BPIFB1Q8TDL5 484 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 ATXN2LQ8WWM7 1075 aaKnown RBP12.93□□□□□ -0.34
SHMT2-221ENST00000555773 OTUB2Q96DC9 234 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-221ENST00000555773 RAB6CQ9H0N0 254 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 THEGQ9P2T0 379 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 AGO1Q9UL18 857 aaKnown RBP12.93□□□□□ -0.34
SHMT2-221ENST00000555773 FZD10Q9ULW2 581 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
SHMT2-221ENST00000555773 CAPN6Q9Y6Q1 641 aa12.93□□□□□ -0.34
SHMT2-221ENST00000555773 ZNF638Q14966 1978 aaKnown RBP12.92□□□□□ -0.34
SHMT2-221ENST00000555773 CCDC66A2RUB6 948 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 HEPACAM2A8MVW5 462 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 PSTPIP1O43586 416 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 ACSL4O60488 711 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 PAGE1O75459 146 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 TUBB4AP04350 444 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 IRF1P10914 325 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 FCARP24071 287 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 IL1R2P27930 398 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 CHKAP35790 457 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 ZNF135P52742 658 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-221ENST00000555773 SLC25A11Q02978 314 aaKnown RBP12.92□□□□□ -0.34
SHMT2-221ENST00000555773 TFF2Q03403 129 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 USP4Q13107 963 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 EFHC2Q5JST6 749 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 ZNF569Q5MCW4 686 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 DENND1CQ8IV53 801 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 DEPDC1BQ8WUY9 529 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 CD101Q93033 1021 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 DOCK6Q96HP0 2047 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 RPGRIP1Q96KN7 1286 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 PRDM6Q9NQX0 595 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 DDX56Q9NY93 547 aaKnown RBP12.92□□□□□ -0.34
SHMT2-221ENST00000555773 IGSF9Q9P2J2 1179 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 PRKAG3Q9UGI9 489 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 JRKLQ9Y4A0 524 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 PCDHA3Q9Y5H8 950 aa12.92□□□□□ -0.34
SHMT2-221ENST00000555773 C2CD4DB7Z1M9 353 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 MOCS2O96007 188 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-221ENST00000555773 RARAP10276 462 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 PSMC3P17980 439 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 CTNNA2P26232 953 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 L1CAMP32004 1257 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 HTR7P34969 479 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 CTNNA1P35221 906 aaKnown RBP12.91□□□□□ -0.34
SHMT2-221ENST00000555773 TAS2R40P59535 323 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 NRG1Q02297 640 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-221ENST00000555773 FCHO2Q0JRZ9 810 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 PDK2Q15119 407 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 MEI1Q5TIA1 1274 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 PARM1Q6UWI2 310 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 LRRC31Q6UY01 552 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 CYP4V2Q6ZWL3 525 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-221ENST00000555773 MAP7D3Q8IWC1 876 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 FAM217AQ8IXS0 508 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 YAF2Q8IY57 180 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 ADGRG2Q8IZP9 1017 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 CPXM2Q8N436 756 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 CCDC185Q8N715 623 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 UBL4BQ8N7F7 174 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 OSCP1Q8WVF1 389 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 WBP2Q969T9 261 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 RSPRY1Q96DX4 576 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 HES6Q96HZ4 224 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 LRRC3BQ96PB8 259 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 PEBP4Q96S96 227 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 GOLPH3Q9H4A6 298 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 ZWILCHQ9H900 591 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 OR12D3Q9UGF7 316 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 AP4E1Q9UPM8 1137 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 HYOU1Q9Y4L1 999 aa12.91□□□□□ -0.34
SHMT2-221ENST00000555773 LOC730098B7Z3J9 87 aa12.9□□□□□ -0.34
SHMT2-221ENST00000555773 I6L893 689 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-221ENST00000555773 FTCDO95954 541 aa12.9□□□□□ -0.34
SHMT2-221ENST00000555773 IL9P15248 144 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms