RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SLC2A4RGQ9NR83 387 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 PARVAQ9NVD7 372 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 DDIT4Q9NX09 232 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 DUS2Q9NX74 493 aaKnown RBP11.35□□□□□ -0.59
SHMT2-218ENST00000555213 SFMBT1Q9UHJ3 866 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 TLR6Q9Y2C9 796 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 JRKLQ9Y4A0 524 aa11.35□□□□□ -0.59
SHMT2-218ENST00000555213 TMEM191CA6NGB0 347 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 IRAK2O43187 625 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 STC2O76061 302 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 LATS1O95835 1130 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 TRUB2O95900 331 aaKnown RBP11.34□□□□□ -0.59
SHMT2-218ENST00000555213 FTCDO95954 541 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 ADH1CP00326 375 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 F9P00740 461 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 FYNP06241 537 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 HMBSP08397 361 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 CORO1AP31146 461 aaKnown RBP11.34□□□□□ -0.59
SHMT2-218ENST00000555213 SLC11A2P49281 568 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 SULT1E1P49888 294 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 TBX4P57082 545 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 RPL7AP62424 266 aaKnown RBP11.34□□□□□ -0.59
SHMT2-218ENST00000555213 OGDHQ02218 1023 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 RING1Q06587 406 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 SYPL2Q5VXT5 272 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 ADAM32Q8TC27 787 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 RNF34Q969K3 372 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 EXOC4Q96A65 974 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 MSANTD3Q96H12 275 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 MRPL47Q9HD33 250 aaKnown RBP11.34□□□□□ -0.59
SHMT2-218ENST00000555213 TRPV5Q9NQA5 729 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 GKN1Q9NS71 199 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 CTTNBP2NLQ9P2B4 639 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 UVRAGQ9P2Y5 699 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 ALG6Q9Y672 507 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 WNT6Q9Y6F9 365 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 DENND4CQ5VZ89 1909 aa11.34□□□□□ -0.59
SHMT2-218ENST00000555213 HELZP42694 1942 aaKnown RBP11.33□□□□□ -0.6
SHMT2-218ENST00000555213 ANAPC1Q9H1A4 1944 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 NCOR1O75376 2440 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 SYNJ2BP-COX16A0A087WUM0 186 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 CTAGE9A4FU28 777 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 SIGLEC16A6NMB1 481 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 M0QYT0 321 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 RIOK3O14730 519 aaKnown RBP11.33□□□□□ -0.6
SHMT2-218ENST00000555213 DDX3YO15523 660 aaKnown RBP11.33□□□□□ -0.6
SHMT2-218ENST00000555213 NARSO43776 548 aaKnown RBP11.33□□□□□ -0.6
SHMT2-218ENST00000555213 SRGAP2O75044 1071 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 URI1O94763 535 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-218ENST00000555213 PDGFRAP16234 1089 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 GPD1P21695 349 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 CCR1P32246 355 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 RDXP35241 583 aaKnown RBP11.33□□□□□ -0.6
SHMT2-218ENST00000555213 FLT3P36888 993 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 NAP1L1P55209 391 aaKnown RBP11.33□□□□□ -0.6
SHMT2-218ENST00000555213 ZXDAP98168 799 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 ZNF252P-AS1Q0IIN9 211 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 NR1H3Q13133 447 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 NME3Q13232 169 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 ITPRIPL2Q3MIP1 535 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 SLC25A52Q3SY17 297 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 C1orf228Q6PIY5 440 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 HTR3DQ70Z44 454 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 LRRN4CLQ8ND94 238 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 ZNF564Q8TBZ8 553 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-218ENST00000555213 CD101Q93033 1021 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 HES6Q96HZ4 224 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 SHDQ96IW2 340 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 ZFYVE19Q96K21 471 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 LRRC3BQ96PB8 259 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 MCEEQ96PE7 176 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 DDX50Q9BQ39 737 aaKnown RBP11.33□□□□□ -0.6
SHMT2-218ENST00000555213 ARHGEF3Q9NR81 526 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 COX16Q9P0S2 106 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 WNT16Q9UBV4 365 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 SLC12A6Q9UHW9 1150 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 CDC23Q9UJX2 597 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 TMEM59LQ9UK28 342 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 PACSIN2Q9UNF0 486 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-218ENST00000555213 HYOU1Q9Y4L1 999 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 MRFAP1Q9Y605 127 aa11.33□□□□□ -0.6
SHMT2-218ENST00000555213 TYW5A2RUC4 315 aaKnown RBP11.32□□□□□ -0.6
SHMT2-218ENST00000555213 C2CD4BA6NLJ0 364 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 PDE2AO00408 941 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-218ENST00000555213 SCAMP3O14828 347 aaKnown RBP11.32□□□□□ -0.6
SHMT2-218ENST00000555213 ZNF185O15231 689 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 IGLV3-25P01717 112 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 IGLV3-27P01718 113 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 GLULP15104 373 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 RFC1P35251 1148 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-218ENST00000555213 CHKAP35790 457 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 PTPN9P43378 593 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 PEX5P50542 639 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 ZXDBP98169 803 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 DEUP1Q05D60 604 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 SIGLEC14Q08ET2 396 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 RUNX3Q13761 415 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 IFI16Q16666 785 aaKnown RBP11.32□□□□□ -0.6
SHMT2-218ENST00000555213 EML3Q32P44 896 aa11.32□□□□□ -0.6
SHMT2-218ENST00000555213 TRNP1Q6NT89 227 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms