RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 DENND1CQ8IV53 801 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 CCDC117Q8IWD4 279 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 DEFB106AQ8N104 65 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 ZNF557Q8N988 423 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 FLCNQ8NFG4 579 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 SLC30A5Q8TAD4 765 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 DQX1Q8TE96 717 aaKnown RBP11.03□□□□□ -0.64
TMEM260-206ENST00000555046 CLEC4CQ8WTT0 213 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 MRFAP1L1Q96HT8 127 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 SELENOOQ9BVL4 669 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 TBC1D17Q9HA65 648 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 SPHK2Q9NRA0 654 aa11.03□□□□□ -0.64
TMEM260-206ENST00000555046 NOTCH4Q99466 2003 aa11.02□□□□□ -0.64
TMEM260-206ENST00000555046 TYW5A2RUC4 315 aaKnown RBP11.02□□□□□ -0.65
TMEM260-206ENST00000555046 SIGLEC16A6NMB1 481 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 GOLGA6L6A8MZA4 724 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 MDM4O15151 490 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 RTN2O75298 545 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 DAB1O75553 588 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 ZIC2O95409 532 aaPredicted RBP11.02□□□□□ -0.65
TMEM260-206ENST00000555046 LMNAP02545 664 aaKnown RBP11.02□□□□□ -0.65
TMEM260-206ENST00000555046 FTLP02792 175 aaPredicted RBP11.02□□□□□ -0.65
TMEM260-206ENST00000555046 FYNP06241 537 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 HMBSP08397 361 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 ADH5P11766 374 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 SKILP12757 684 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 ARSAP15289 507 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 CTHP32929 405 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 TNK2Q07912 1038 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 UBXN2BQ14CS0 331 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 ANO4Q32M45 955 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 SLC25A52Q3SY17 297 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 MPPE1Q53F39 396 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 LY6G5CQ5SRR4 150 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 MPP7Q5T2T1 576 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 SYPL2Q5VXT5 272 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 TRIM68Q6AZZ1 485 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 RHBDF2Q6PJF5 856 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 Q6ZNB5 142 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 ZNF571Q7Z3V5 609 aaPredicted RBP11.02□□□□□ -0.65
TMEM260-206ENST00000555046 GAS2L3Q86XJ1 694 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 BBS7Q8IWZ6 715 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 CPXM2Q8N436 756 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 ATP6V0D2Q8N8Y2 350 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 C3orf20Q8ND61 904 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 TMA16Q96EY4 203 aaKnown RBP11.02□□□□□ -0.65
TMEM260-206ENST00000555046 PCDHB18PQ96TA0 734 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 DNAJC7Q99615 494 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 P2RY13Q9BPV8 354 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 NCAPGQ9BPX3 1015 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 IER2Q9BTL4 223 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 DEF6Q9H4E7 631 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 WDCPQ9H6R7 721 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 FAM204AQ9H8W3 233 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 MRPL47Q9HD33 250 aaKnown RBP11.02□□□□□ -0.65
TMEM260-206ENST00000555046 LTB4R2Q9NPC1 389 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 HPS4Q9NQG7 708 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 PARVAQ9NVD7 372 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 ADAMTS1Q9UHI8 967 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 STOML2Q9UJZ1 356 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 AGO1Q9UL18 857 aaKnown RBP11.02□□□□□ -0.65
TMEM260-206ENST00000555046 FARP1Q9Y4F1 1045 aaPredicted RBP11.02□□□□□ -0.65
TMEM260-206ENST00000555046 DOCK6Q96HP0 2047 aa11.02□□□□□ -0.65
TMEM260-206ENST00000555046 C2orf16Q68DN1 1984 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 SSU72P8A0A1W2PR75 194 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 GOLGA8SH3BPF8 625 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 M0QYT0 321 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 HOXC11O43248 304 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-206ENST00000555046 GREM1O60565 184 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 ATG13O75143 517 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 GRAP2O75791 330 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 PDGFRAP16234 1089 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 AOC1P19801 751 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 SDC4P31431 198 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 GJA4P35212 333 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 RPS9P46781 194 aaKnown RBP11.01□□□□□ -0.65
TMEM260-206ENST00000555046 GALK1P51570 392 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 ZNF75DP51815 510 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 PPP2R5DQ14738 602 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 ARID5BQ14865 1188 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 TAF5Q15542 800 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 BRMS1LQ5PSV4 323 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 DNAJC24Q6P3W2 148 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 DCUN1D2Q6PH85 259 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 TMC6Q7Z403 805 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 MCOLN2Q8IZK6 566 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 TTC8Q8TAM2 541 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 KCNV2Q8TDN2 545 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 CD101Q93033 1021 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 NT5C3BQ969T7 300 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 PGAP3Q96FM1 320 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-206ENST00000555046 BTN2A3PQ96KV6 586 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 CCDC42Q96M95 316 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 PNKPQ96T60 521 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 C11orf70Q9BRQ4 267 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 SYT11Q9BT88 431 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 BBS2Q9BXC9 721 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 SLC2A11Q9BYW1 496 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 DDIT4Q9NX09 232 aa11.01□□□□□ -0.65
TMEM260-206ENST00000555046 MARK1Q9P0L2 795 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms