RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 MYO1FO00160 1098 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 ABLIM1O14639 778 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 ZBTB5O15062 677 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PMM2O15305 246 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 RGS16O15492 202 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 BUB1BO60566 1050 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 LPXNO60711 386 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 HNRNPCL1O60812 293 aaKnown RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PHF2O75151 1096 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 MTA2O94776 668 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 SUN1O94901 812 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 C8AP07357 584 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 GLI4P10075 376 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PDHBP11177 359 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 FGFR1P11362 822 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 CYP2C9P11712 490 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PABPC1P11940 636 aaKnown RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 RARGP13631 454 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 DRD4P21917 467 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PON1P27169 355 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 RPA1P27694 616 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 VIPR1P32241 457 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 SOX5P35711 763 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PSMC2P35998 433 aaKnown RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 STAT2P52630 851 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PMS2P54278 862 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 ENPEPQ07075 957 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 CCDC15Q0P6D6 951 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 MAP4K2Q12851 820 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 MAPK7Q13164 816 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 CBX2Q14781 532 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PWP2Q15269 919 aaKnown RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 EPHA7Q15375 998 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 ZNF124Q15973 351 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 FAM153CQ494X1 144 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 Q4G0T1 1027 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 DUSP28Q4G0W2 176 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 FAM47CQ5HY64 1035 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 ACBD5Q5T8D3 534 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 BICRALQ6AI39 1079 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 TAPT1Q6NXT6 567 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 RPTNQ6XPR3 784 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PIGWQ7Z7B1 504 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 FAM160B2Q86V87 743 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 FBXO16Q8IX29 292 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PPIL6Q8IXY8 311 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 LRRC47Q8N1G4 583 aaKnown RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 LILRB2Q8N423 598 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 RIBC1Q8N443 379 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 SH2D3CQ8N5H7 860 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 METTL13Q8N6R0 699 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 MAB21L3Q8N8X9 362 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 SYT2Q8N9I0 419 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 FBXO15Q8NCQ5 510 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 LRRC15Q8TF66 581 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 CHURC1Q8WUH1 139 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 DCAF4Q8WV16 495 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 SCFD1Q8WVM8 642 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 RAPGEF5Q92565 580 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 HVCN1Q96D96 273 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 MS4A14Q96JA4 679 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 FAM84AQ96KN4 292 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 SNX27Q96L92 541 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 SERPINB12Q96P63 405 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 RAB3IPQ96QF0 476 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 UIMC1Q96RL1 719 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PIGSQ96S52 555 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 SRPK1Q96SB4 655 aaKnown RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PSMB7Q99436 277 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 KRTAP4-12Q9BQ66 201 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 JPH2Q9BR39 696 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 MTG1Q9BT17 334 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 POLR3CQ9BUI4 534 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 TRIM7Q9C029 511 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 CENPHQ9H3R5 247 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 UBE2ZQ9H832 354 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 GCM1Q9NP62 436 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 KCNMB3Q9NPA1 279 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 CD320Q9NPF0 282 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PPANQ9NQ55 473 aaKnown RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PDGFCQ9NRA1 345 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 MTMR4Q9NYA4 1195 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 CTNNAL1Q9UBT7 734 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 FAM153AQ9UHL3 310 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 SLC12A4Q9UP95 1085 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 NPFFR2Q9Y5X5 522 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 CHD9Q3L8U1 2897 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PIEZO1Q92508 2521 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PRRC2BQ5JSZ5 2229 aaKnown RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 IGKV6D-41A0A0C4DH26 115 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 ESYT3A0FGR9 886 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 ETV2O00321 342 aaPredicted RBP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 NKRFO15226 690 aaKnown RBP eCLIP6.23□□□□□ -1.41
VPS33B-203ENST00000554264 MAPK13O15264 365 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 SLC37A4O43826 429 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 NPHS1O60500 1241 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 KPNA6O60684 536 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 PLA2G6O60733 806 aa6.23□□□□□ -1.41
VPS33B-203ENST00000554264 TCEA3O75764 348 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms