RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 BTN2A3PQ96KV6 586 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 FCRL2Q96LA5 508 aaPredicted RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 C1orf74Q96LT6 269 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 CSPG4P5Q96PW8 444 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 RNF157Q96PX1 679 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 KCTD15Q96SI1 283 aaPredicted RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 EPAS1Q99814 870 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 MAK16Q9BXY0 300 aaKnown RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 PRKD2Q9BZL6 878 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 NACA2Q9H009 215 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 TKTL2Q9H0I9 626 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 SLITRK6Q9H5Y7 841 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 DHX35Q9H5Z1 703 aaKnown RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 NSUN3Q9H649 340 aaKnown RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 SFXN1Q9H9B4 322 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 ZNF334Q9HCZ1 680 aaPredicted RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 RBM12Q9NTZ6 932 aaKnown RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 GPATCH2LQ9NWQ4 482 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 SMARCAL1Q9NZC9 954 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 COX16Q9P0S2 106 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 SFMBT1Q9UHJ3 866 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 SLC12A6Q9UHW9 1150 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 RASAL2Q9UJF2 1139 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 TRIOBPQ9H2D6 2365 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 ZNF638Q14966 1978 aaKnown RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 SLC12A8A0AV02 714 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 SPDYE4A6NLX3 237 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 I6L893 689 aaPredicted RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 EEF2KO00418 725 aaKnown RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 ZNF197O14709 1029 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 APOL1O14791 398 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 FGF10O15520 208 aaPredicted RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 PAGE1O75459 146 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 RFPL2O75678 378 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 ZNF189O75820 626 aaPredicted RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 LATS1O95835 1130 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 TBX18O95935 607 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 CD48P09326 243 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 IL4RP24394 825 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 NR2C2P49116 596 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 SLC7A9P82251 487 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 MLLT1Q03111 559 aaPredicted RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 DPYSQ14117 519 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 CCNG2Q16589 344 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 ARHGAP15Q53QZ3 475 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 ANKRD20A8PQ5CZ79 823 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 MANEALQ5VSG8 457 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 RFX8Q6ZV50 586 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 PDZD4Q76G19 769 aaPredicted RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 ANKS1BQ7Z6G8 1248 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 RBM23Q86U06 439 aaKnown RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 MIB1Q86YT6 1006 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 RFX6Q8HWS3 928 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 PRELID2Q8N945 189 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 UBXN4Q92575 508 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 RUBCNQ92622 972 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 SLCO2A1Q92959 643 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 ZNF707Q96C28 371 aaPredicted RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 CORO1BQ9BR76 489 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 DCLK3Q9C098 648 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 ZNF576Q9H609 170 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 RETREG1Q9H6L5 497 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 LRRC19Q9H756 370 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 ANLNQ9NQW6 1124 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 DONSONQ9NYP3 566 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 CWC15Q9P013 229 aaKnown RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 OR12D3Q9UGF7 316 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 PCYOX1Q9UHG3 505 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 FEZ2Q9UHY8 353 aaPredicted RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 NUDT5Q9UKK9 219 aa7.92□□□□□ -1.14
TDP1-209ENST00000554180 TNRC18O15417 2968 aaPredicted RBP7.92□□□□□ -1.14
TDP1-209ENST00000554180 IGLV3-10A0A075B6K4 115 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 TRAV19A0A0A6YYK7 116 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 TCRBV7S2A1N4TA0A589 114 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 TARSL2A2RTX5 802 aaKnown RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 C2orf78A6NCI8 922 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 PER2O15055 1255 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 CST8O60676 142 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 LRIG2O94898 1065 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 TUBBP07437 444 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 RHOP08100 348 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 MBL2P11226 248 aaPredicted RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 MYL4P12829 197 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 KRT10P13645 584 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 GOT1P17174 413 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 HOXB8P17481 243 aaPredicted RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 HDCP19113 662 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 POU3F3P20264 500 aaPredicted RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 SERPINB6P35237 376 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 HARS2P49590 506 aaKnown RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 MLLT6P55198 1093 aaPredicted RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 TPI1P60174 286 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 LMNB2Q03252 620 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 C2orf54Q08AI8 447 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 MMRN1Q13201 1228 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 DHX34Q14147 1143 aaKnown RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 TEX35Q5T0J7 233 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 KAZNQ674X7 775 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 C8orf74Q6P047 294 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 BZW1Q7L1Q6 419 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms