RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 USP39Q53GS9 565 aaKnown RBP18.99■□□□□ 0.63
SHMT2-206ENST00000553529 SCML4Q8N228 414 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 CPXM2Q8N436 756 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 C1orf131Q8NDD1 294 aaKnown RBP18.99■□□□□ 0.63
SHMT2-206ENST00000553529 IPO4Q8TEX9 1081 aaKnown RBP18.99■□□□□ 0.63
SHMT2-206ENST00000553529 HSFY1Q96LI6 401 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 GABRG3Q99928 467 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 TUBGCP2Q9BSJ2 902 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 NUCKS1Q9H1E3 243 aaKnown RBP18.99■□□□□ 0.63
SHMT2-206ENST00000553529 NDST4Q9H3R1 872 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 POLMQ9NP87 494 aaPredicted RBP18.99■□□□□ 0.63
SHMT2-206ENST00000553529 OLA1Q9NTK5 396 aaKnown RBP18.99■□□□□ 0.63
SHMT2-206ENST00000553529 TMEM74BQ9NUR3 256 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 CDV3Q9UKY7 258 aaKnown RBP18.99■□□□□ 0.63
SHMT2-206ENST00000553529 HBS1LQ9Y450 684 aaKnown RBP18.99■□□□□ 0.63
SHMT2-206ENST00000553529 STON1Q9Y6Q2 735 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 NUP205Q92621 2012 aa18.99■□□□□ 0.63
SHMT2-206ENST00000553529 MOCS2O96007 188 aaPredicted RBP18.98■□□□□ 0.63
SHMT2-206ENST00000553529 ERBB2P04626 1255 aa18.98■□□□□ 0.63
SHMT2-206ENST00000553529 CHKAP35790 457 aa18.98■□□□□ 0.63
SHMT2-206ENST00000553529 TBX4P57082 545 aa18.98■□□□□ 0.63
SHMT2-206ENST00000553529 PUM1Q14671 1186 aaKnown RBP eCLIP18.98■□□□□ 0.63
SHMT2-206ENST00000553529 AASDHQ4L235 1098 aaPredicted RBP18.98■□□□□ 0.63
SHMT2-206ENST00000553529 IRGQQ8WZA9 623 aa18.98■□□□□ 0.63
SHMT2-206ENST00000553529 ADAM33Q9BZ11 813 aa18.98■□□□□ 0.63
SHMT2-206ENST00000553529 DCLK3Q9C098 648 aa18.98■□□□□ 0.63
SHMT2-206ENST00000553529 MTG2Q9H4K7 406 aa18.98■□□□□ 0.63
SHMT2-206ENST00000553529 STIM2Q9P246 746 aa18.98■□□□□ 0.63
SHMT2-206ENST00000553529 CYP8B1Q9UNU6 501 aa18.98■□□□□ 0.63
SHMT2-206ENST00000553529 PLXND1Q9Y4D7 1925 aa18.98■□□□□ 0.63
SHMT2-206ENST00000553529 SYNJ2BP-COX16A0A087WUM0 186 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 BCLAF3A2AJT9 711 aaKnown RBP18.97■□□□□ 0.63
SHMT2-206ENST00000553529 CD70P32970 193 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 HARS2P49590 506 aaKnown RBP18.97■□□□□ 0.63
SHMT2-206ENST00000553529 RPS24P62847 133 aaKnown RBP18.97■□□□□ 0.63
SHMT2-206ENST00000553529 ZNF234Q14588 700 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 STILQ15468 1287 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 FUT11Q495W5 492 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 C2CD6Q53TS8 623 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 MMS22LQ6ZRQ5 1243 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 FAM183BPQ6ZVS7 135 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 CFAP52Q8N1V2 620 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 LSM14BQ9BX40 385 aaKnown RBP18.97■□□□□ 0.63
SHMT2-206ENST00000553529 CIPCQ9C0C6 399 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 MKRN2Q9H000 416 aaKnown RBP18.97■□□□□ 0.63
SHMT2-206ENST00000553529 ABCB8Q9NUT2 735 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 COX16Q9P0S2 106 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 ZNF510Q9Y2H8 683 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 SLC27A6Q9Y2P4 619 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 NFE2L3Q9Y4A8 694 aa18.97■□□□□ 0.63
SHMT2-206ENST00000553529 CEP192Q8TEP8 1941 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 PES1O00541 588 aaKnown RBP18.96■□□□□ 0.63
SHMT2-206ENST00000553529 EPHB6O15197 1021 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 TBL1XO60907 577 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 ALDH1A2O94788 518 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 ZNF806P0C7X5 589 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 TFE3P19532 575 aaPredicted RBP18.96■□□□□ 0.63
SHMT2-206ENST00000553529 KCNA4P22459 653 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 GGCXP38435 758 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 RAPGEF1Q13905 1077 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 ELF2Q15723 593 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 HSF5Q4G112 596 aaPredicted RBP18.96■□□□□ 0.63
SHMT2-206ENST00000553529 PTPN20Q4JDL3 420 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 TAF3Q5VWG9 929 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 ANKS1BQ7Z6G8 1248 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 CIR1Q86X95 450 aaPredicted RBP18.96■□□□□ 0.63
SHMT2-206ENST00000553529 CCDC26Q8TAB7 109 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 PIGKQ92643 395 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 MRGPRX1Q96LB2 322 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 THAP10Q9P2Z0 257 aaPredicted RBP18.96■□□□□ 0.63
SHMT2-206ENST00000553529 STOML2Q9UJZ1 356 aa18.96■□□□□ 0.63
SHMT2-206ENST00000553529 IGHV1OR15-9A0A0B4J2B8 117 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 ACSL4O60488 711 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 LRP3O75074 770 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 FBXO21O94952 628 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 CAVIN2O95810 425 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 ITPKAP23677 461 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 ERCC5P28715 1186 aaPredicted RBP18.95■□□□□ 0.62
SHMT2-206ENST00000553529 IRAK1P51617 712 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 DRAP1Q14919 205 aaPredicted RBP18.95■□□□□ 0.62
SHMT2-206ENST00000553529 MPPE1Q53F39 396 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 ZC3H12AQ5D1E8 599 aaKnown RBP18.95■□□□□ 0.62
SHMT2-206ENST00000553529 TCP11X2Q5H9J9 407 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 FSCBQ5H9T9 825 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 ADGRF1Q5T601 910 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 PIK3R6Q5UE93 754 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 OTUD1Q5VV17 481 aaPredicted RBP18.95■□□□□ 0.62
SHMT2-206ENST00000553529 KIAA1324Q6UXG2 1013 aaKnown RBP18.95■□□□□ 0.62
SHMT2-206ENST00000553529 CHST9Q7L1S5 443 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 TMEM110Q86TL2 294 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 ADIPOR2Q86V24 386 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 GPR161Q8N6U8 529 aaKnown RBP18.95■□□□□ 0.62
SHMT2-206ENST00000553529 TMA16Q96EY4 203 aaKnown RBP18.95■□□□□ 0.62
SHMT2-206ENST00000553529 SLC39A13Q96H72 371 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 LOXL4Q96JB6 756 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 VPS16Q9H269 839 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 ADAMTS9Q9P2N4 1935 aa18.95■□□□□ 0.62
SHMT2-206ENST00000553529 GTPBP10A4D1E9 387 aaKnown RBP18.94■□□□□ 0.62
SHMT2-206ENST00000553529 RHOBTB1O94844 696 aa18.94■□□□□ 0.62
SHMT2-206ENST00000553529 CYBBP04839 570 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms