RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 EGFLAMQ63HQ2 1017 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 NUGGCQ68CJ6 796 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 TMEM215Q68D42 235 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 SLC26A9Q7LBE3 791 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 BHMTQ93088 406 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 ACOX2Q99424 681 aa20.07■□□□□ 0.8
PTCH1-227ENST00000553256 GOLGA6L7A0A1B0GV03 622 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 KCNU1A8MYU2 1149 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 TEX33O43247 280 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 ACSL4O60488 711 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 KLF8O95600 359 aaPredicted RBP20.06■□□□□ 0.8
PTCH1-227ENST00000553256 APBB3O95704 486 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 CYP1A1P04798 512 aaPredicted RBP20.06■□□□□ 0.8
PTCH1-227ENST00000553256 KRT9P35527 623 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 SOX5P35711 763 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 POLR2FP61218 127 aaKnown RBP20.06■□□□□ 0.8
PTCH1-227ENST00000553256 NOMO3P69849 1222 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 PREPLQ4J6C6 727 aaPredicted RBP20.06■□□□□ 0.8
PTCH1-227ENST00000553256 FKBP15Q5T1M5 1219 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 PIK3R6Q5UE93 754 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 DCLK2Q8N568 766 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.06■□□□□ 0.8
PTCH1-227ENST00000553256 ADAM32Q8TC27 787 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 SLC20A1Q8WUM9 679 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 GAB3Q8WWW8 586 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 NT5C3BQ969T7 300 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 FAM149B1Q96BN6 582 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 PRICKLE1Q96MT3 831 aaPredicted RBP20.06■□□□□ 0.8
PTCH1-227ENST00000553256 SERPINB11Q96P15 392 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 GABRG3Q99928 467 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 SLC2A11Q9BYW1 496 aa20.06■□□□□ 0.8
PTCH1-227ENST00000553256 RTN4Q9NQC3 1192 aaKnown RBP20.06■□□□□ 0.8
PTCH1-227ENST00000553256 XPO7Q9UIA9 1087 aaKnown RBP20.06■□□□□ 0.8
PTCH1-227ENST00000553256 HSF2BPO75031 334 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 LSM8O95777 96 aaKnown RBP20.05■□□□□ 0.8
PTCH1-227ENST00000553256 TRUB2O95900 331 aaKnown RBP20.05■□□□□ 0.8
PTCH1-227ENST00000553256 MMEP08473 750 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 ZNF445P59923 1031 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 FMO1Q01740 532 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 SLC6A3Q01959 620 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 MPPE1Q53F39 396 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 MPP7Q5T2T1 576 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 ARTNQ5T4W7 220 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 BNIPLQ7Z465 357 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 UNC45BQ8IWX7 931 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 DEFB106AQ8N104 65 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 ZNF513Q8N8E2 541 aaPredicted RBP20.05■□□□□ 0.8
PTCH1-227ENST00000553256 TMEM35BQ8NCS4 154 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 MDGA1Q8NFP4 955 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 RUBCNQ92622 972 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 GOLGA1Q92805 767 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 TRIM62Q9BVG3 475 aa20.05■□□□□ 0.8
PTCH1-227ENST00000553256 SPTBN4Q9H254 2564 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 AXIN1O15169 862 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 GFPT2O94808 682 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 C7P10643 843 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 HLA-FP30511 346 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 SCNN1AP37088 669 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 ZNF165P49910 485 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 DGKEP52429 567 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 UBXN1Q04323 297 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 EFHC1Q5JVL4 640 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 TAF3Q5VWG9 929 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 TRNP1Q6NT89 227 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 RFWD3Q6PCD5 774 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 ZNF677Q86XU0 584 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 XYLT1Q86Y38 959 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 WFDC5Q8TCV5 224 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 ZC3H10Q96K80 434 aaKnown RBP20.04■□□□□ 0.8
PTCH1-227ENST00000553256 PCDHB18PQ96TA0 734 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 PRMT1Q99873 361 aaKnown RBP20.04■□□□□ 0.8
PTCH1-227ENST00000553256 SYT11Q9BT88 431 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 NAT10Q9H0A0 1025 aaKnown RBP20.04■□□□□ 0.8
PTCH1-227ENST00000553256 NLRC4Q9NPP4 1024 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 CEP250Q9BV73 2442 aa20.04■□□□□ 0.8
PTCH1-227ENST00000553256 SYCE3A1L190 88 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 I6L893 689 aaPredicted RBP20.03■□□□□ 0.8
PTCH1-227ENST00000553256 TSPAN3O60637 253 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 DAB1O75553 588 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 CDR2Q01850 454 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 PTP4A2Q12974 167 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 ZC3H12AQ5D1E8 599 aaKnown RBP20.03■□□□□ 0.8
PTCH1-227ENST00000553256 EOGTQ5NDL2 527 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 ZDHHC17Q8IUH5 632 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 TSTD1Q8NFU3 115 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 BAP1Q92560 729 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 TMA16Q96EY4 203 aaKnown RBP20.03■□□□□ 0.8
PTCH1-227ENST00000553256 NAP1L5Q96NT1 182 aaPredicted RBP20.03■□□□□ 0.8
PTCH1-227ENST00000553256 NOX5Q96PH1 765 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 NPY6RQ99463 290 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 NUCKS1Q9H1E3 243 aaKnown RBP20.03■□□□□ 0.8
PTCH1-227ENST00000553256 THAP10Q9P2Z0 257 aaPredicted RBP20.03■□□□□ 0.8
PTCH1-227ENST00000553256 TMEM59LQ9UK28 342 aa20.03■□□□□ 0.8
PTCH1-227ENST00000553256 A0A1B0GTH6 734 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 GRAP2O75791 330 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 RPP40O75818 363 aaKnown RBP20.02■□□□□ 0.8
PTCH1-227ENST00000553256 UNGP13051 313 aaPredicted RBP20.02■□□□□ 0.8
PTCH1-227ENST00000553256 TFE3P19532 575 aaPredicted RBP20.02■□□□□ 0.8
PTCH1-227ENST00000553256 NTSR1P30989 418 aa20.02■□□□□ 0.8
PTCH1-227ENST00000553256 SIM2Q14190 667 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms