RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 BHMTQ93088 406 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 ELF4Q99607 663 aaPredicted RBP11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 SMOQ99835 787 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 FGFBP2Q9BYJ0 223 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 NACA2Q9H009 215 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 LHX5Q9H2C1 402 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 TLR8Q9NR97 1041 aaKnown RBP11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 OLFML3Q9NRN5 406 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 KIF3AQ9Y496 699 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 BOD1L1Q8NFC6 3051 aa11.96□□□□□ -0.5
SUPT16H-202ENST00000552829 TLN1Q9Y490 2541 aaKnown RBP11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 ATP8B3O60423 1300 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 ZNF233A6NK53 670 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 A8MXQ7 604 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 KIAA0391O15091 583 aaKnown RBP11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 TIMM44O43615 452 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 STC2O76061 302 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 BEST1O76090 585 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 WNT1P04628 370 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 IGHV4-34P06331 123 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 PLA2G4AP47712 749 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 CSRP3P50461 194 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 UCNP55089 124 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 KANSL1Q7Z3B3 1105 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 ANKS1BQ7Z6G8 1248 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 CACUL1Q86Y37 369 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 CBWD2Q8IUF1 395 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 FUKQ8N0W3 1084 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 ZNF276Q8N554 614 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 ZNF248Q8NDW4 579 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 SORCS1Q8WY21 1168 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 MED8Q96G25 268 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 SMARCD1Q96GM5 515 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 XYLT2Q9H1B5 865 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 TMEM245Q9H330 911 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 FBXO44Q9H4M3 255 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 CPNE5Q9HCH3 593 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 CSNK1G1Q9HCP0 422 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 TBC1D7Q9P0N9 293 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 CLEC4EQ9ULY5 219 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 SCML2Q9UQR0 700 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 DOCK9Q9BZ29 2069 aa11.95□□□□□ -0.5
SUPT16H-202ENST00000552829 FRMD3A2A2Y4 597 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 MDM4O15151 490 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 PRPF6O94906 941 aaKnown RBP11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 FSBPO95073 299 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 GCNT3O95395 438 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 ITGAVP06756 1048 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 EPHX1P07099 455 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 GLDCP23378 1020 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 LONP1P36776 959 aaKnown RBP11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 TMPRSS3P57727 454 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 RPS14P62263 151 aaKnown RBP11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 ZBTB16Q05516 673 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 GOLGA8FQ08AF8 430 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 GOLGA8DPQ0D2H9 430 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 ALCAMQ13740 583 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 WDR72Q3MJ13 1102 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 ARHGAP40Q5TG30 622 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 SFMBT2Q5VUG0 894 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 SYCP3Q8IZU3 236 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 EID2Q8N6I1 236 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 LGMNQ99538 433 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 ACE2Q9BYF1 805 aaPredicted RBP11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 SLC2A11Q9BYW1 496 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 BTBD1Q9H0C5 482 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 EBF2Q9HAK2 575 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 NMUR1Q9HB89 426 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 SGK2Q9HBY8 427 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 CLCA2Q9UQC9 943 aa11.94□□□□□ -0.5
SUPT16H-202ENST00000552829 A0A1W2PPC4 97 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 A0A1W2PR77 199 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 HHLA1C9JL84 531 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 YKT6O15498 198 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 SLC28A2O43868 658 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 AP1G2O75843 785 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 DXOO77932 396 aaKnown RBP11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 CHKAP35790 457 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 RXRGP48443 463 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 BCAT1P54687 386 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 C21orf59P57076 290 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 TNNC1P63316 161 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 INSM1Q01101 510 aaPredicted RBP11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 KIAA0895LQ68EN5 471 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 FAM173BQ6P4H8 233 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 SERPINA13PQ6UXR4 307 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 GPRIN1Q7Z2K8 1008 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 ADAT2Q7Z6V5 191 aaKnown RBP11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 ZNF516Q92618 1163 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 ZNF578Q96N58 590 aaPredicted RBP11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 MED10Q9BTT4 135 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 GZF1Q9H116 711 aaPredicted RBP11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 VRTNQ9H8Y1 702 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 FBRSQ9HAH7 460 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 GDPD2Q9HCC8 539 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 ZNF510Q9Y2H8 683 aa11.93□□□□□ -0.5
SUPT16H-202ENST00000552829 LRRK2Q5S007 2527 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 GOLGA6L22H0YM25 854 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 CKMT2P17540 419 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms