RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CASP8AP2Q9UKL3 1982 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 A0A1B0GVG6 124 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 TMEM191CA6NGB0 347 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 C2CD2LO14523 706 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 MED7O43513 233 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 LRCH4O75427 683 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 LCP1P13796 627 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 MORF4L2Q15014 288 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 SLC45A4Q5BKX6 768 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 UBXN11Q5T124 520 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 ARMC3Q5W041 872 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 TRMT10BQ6PF06 316 aaKnown RBP11.47□□□□□ -0.57
LINC00661-204ENST00000549354 ACOT1Q86TX2 421 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 TMEM40Q8WWA1 233 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 NSL1Q96IY1 281 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 OSMRQ99650 979 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 EIF2AQ9BY44 585 aaKnown RBP11.47□□□□□ -0.57
LINC00661-204ENST00000549354 MAN1C1Q9NR34 630 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 UBP1Q9NZI7 540 aa11.47□□□□□ -0.57
LINC00661-204ENST00000549354 TMEM88BA6NKF7 163 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 MCF2LO15068 1137 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 DGKIO75912 1065 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 RBL1P28749 1068 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 POLR2BP30876 1174 aaKnown RBP11.46□□□□□ -0.57
LINC00661-204ENST00000549354 CDKN2BP42772 138 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 TAP1Q03518 808 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 CCDC15Q0P6D6 951 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 CTC1Q2NKJ3 1217 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 VWA5B1Q5TIE3 1220 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 MFSD14CQ5VZR4 134 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 TAF2Q6P1X5 1199 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 SLC30A9Q6PML9 568 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 SMC1BQ8NDV3 1235 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 TRIB2Q92519 343 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 INPP5DQ92835 1189 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 MTG1Q9BT17 334 aaPredicted RBP11.46□□□□□ -0.57
LINC00661-204ENST00000549354 ELOVL4Q9GZR5 314 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 DHX35Q9H5Z1 703 aaKnown RBP11.46□□□□□ -0.57
LINC00661-204ENST00000549354 KIAA1257Q9ULG3 409 aa11.46□□□□□ -0.57
LINC00661-204ENST00000549354 A6NHS1 94 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 PDE5AO76074 875 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 ETS2P15036 469 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 NCF2P19878 526 aaPredicted RBP11.46□□□□□ -0.58
LINC00661-204ENST00000549354 SP100P23497 879 aaPredicted RBP11.46□□□□□ -0.58
LINC00661-204ENST00000549354 PHBP35232 272 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 IRX1P78414 480 aaPredicted RBP11.46□□□□□ -0.58
LINC00661-204ENST00000549354 ZNF200P98182 395 aaPredicted RBP11.46□□□□□ -0.58
LINC00661-204ENST00000549354 UBAP2LQ14157 1087 aaKnown RBP11.46□□□□□ -0.58
LINC00661-204ENST00000549354 RASA2Q15283 850 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 OASLQ15646 514 aaKnown RBP11.46□□□□□ -0.58
LINC00661-204ENST00000549354 KBTBD2Q8IY47 623 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.46□□□□□ -0.58
LINC00661-204ENST00000549354 MPP5Q8N3R9 675 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 DCLK2Q8N568 766 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 LRRC52Q8N7C0 313 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 CLEC4CQ8WTT0 213 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 TMEM176AQ96HP8 235 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 ZMAT2Q96NC0 199 aaKnown RBP11.46□□□□□ -0.58
LINC00661-204ENST00000549354 CFHR5Q9BXR6 569 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 SNX9Q9Y5X1 595 aa11.46□□□□□ -0.58
LINC00661-204ENST00000549354 VCANP13611 3396 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 TCRBV9S1A1TA0A576 114 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 MYADML2A6NDP7 307 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 KIF3CO14782 793 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 HMGCRP04035 888 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 ERBB2P04626 1255 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 KCNE1P15382 129 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 VHLP40337 213 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 SERPINB4P48594 390 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 CHI3L2Q15782 390 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 CA9Q16790 459 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 AP1ARQ63HQ0 302 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 LRRC74BQ6ZQY2 392 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 LIMS2Q7Z4I7 341 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
LINC00661-204ENST00000549354 RIBC1Q8N443 379 aaPredicted RBP11.45□□□□□ -0.58
LINC00661-204ENST00000549354 NIPA2Q8N8Q9 360 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 DEPDC1BQ8WUY9 529 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 KIF12Q96FN5 646 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 ZNF358Q9NW07 568 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 SNTG2Q9NY99 539 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 BARX2Q9UMQ3 279 aaPredicted RBP11.45□□□□□ -0.58
LINC00661-204ENST00000549354 GABRQQ9UN88 632 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 NEMP1O14524 444 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 COPEO14579 308 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 CREB3O43889 395 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 ABHD2P08910 425 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 GABRB2P47870 512 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 PTPN11Q06124 597 aaPredicted RBP11.45□□□□□ -0.58
LINC00661-204ENST00000549354 TREML1Q86YW5 311 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 ARFGAP1Q8N6T3 406 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 PPFIBP2Q8ND30 876 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 ARHGAP39Q9C0H5 1083 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 GTF2IRD1Q9UHL9 959 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 SEPT4O43236 478 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 ZWINTO95229 277 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 PSMG1O95456 288 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 VDRP11473 427 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 RPL10AP62906 217 aaKnown RBP11.45□□□□□ -0.58
LINC00661-204ENST00000549354 CFAP157Q5JU67 520 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms