RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 ING5Q8WYH8 240 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 SLC39A13Q96H72 371 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 RBM41Q96IZ5 413 aaKnown RBP10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 EPAS1Q99814 870 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 ARHGEF38Q9NXL2 777 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 RCOR3Q9P2K3 495 aaPredicted RBP10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 SFMBT1Q9UHJ3 866 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 USP18Q9UMW8 372 aa10.14□□□□□ -0.79
SMARCD1-206ENST00000549274 REV3LO60673 3130 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 RCCD1A6NED2 376 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 TMEM110-MUSTN1A8MSY1 372 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 KCNU1A8MYU2 1149 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 BUB1O43683 1085 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 NFATC1O95644 943 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 CYBBP04839 570 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 GJA1P17302 382 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 MIPP30301 263 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 CORO1AP31146 461 aaKnown RBP10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 ADRA1BP35368 520 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 ARL4AP40617 200 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 IFNAR2P48551 515 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 OXCT1P55809 520 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 HDAC4P56524 1084 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 AMPD2Q01433 879 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 NRG1Q02297 640 aaPredicted RBP10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 NR1H3Q13133 447 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 PDK2Q15119 407 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 E2F5Q15329 346 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 ZNF77Q15935 545 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 C15orf59Q2T9L4 293 aaPredicted RBP10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 RABGAP1LQ5R372 815 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 ZFYVE27Q5T4F4 411 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 ADGRF1Q5T601 910 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 ERMARDQ5T6L9 678 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 ZSCAN30Q86W11 494 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 DNAAF5Q86Y56 855 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 MFSD6LQ8IWD5 586 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 REXO1L1PQ8IX06 675 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 CPXM2Q8N436 756 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 ATP2A3Q93084 1043 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 FCRL2Q96LA5 508 aaPredicted RBP10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 C1orf74Q96LT6 269 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 RNF38Q9H0F5 515 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 TKTL2Q9H0I9 626 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 OSBPL2Q9H1P3 480 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 ZWILCHQ9H900 591 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 PIGVQ9NUD9 493 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 STOML2Q9UJZ1 356 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 PYCARDQ9ULZ3 195 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 JRKLQ9Y4A0 524 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 ALG6Q9Y672 507 aa10.13□□□□□ -0.79
SMARCD1-206ENST00000549274 SYNJ2BP-COX16A0A087WUM0 186 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 GRID2IPA4D2P6 1211 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 F5H5T6 163 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 H3BRJ5 948 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 CHADO15335 359 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 ACSL4O60488 711 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 PALMO75781 387 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 ZNF189O75820 626 aaPredicted RBP10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 MOCS3O95396 460 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 GJB6O95452 261 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 TBX18O95935 607 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 ADH1CP00326 375 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 PSMC3P17980 439 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 COMTP21964 271 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 CTNNA2P26232 953 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 L1CAMP32004 1257 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 CTNNA1P35221 906 aaKnown RBP10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 COPS2P61201 443 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 PFKPQ01813 784 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 OGDHQ02218 1023 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 ZNF252P-AS1Q0IIN9 211 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 FAM78AQ5JUQ0 283 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 MPP7Q5T2T1 576 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 TRNP1Q6NT89 227 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 C1orf228Q6PIY5 440 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 FAM131BQ86XD5 332 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 LRRC57Q8N9N7 239 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 ADAM32Q8TC27 787 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 USP13Q92995 863 aaPredicted RBP10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 MSANTD3Q96H12 275 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 ZFRQ96KR1 1074 aaKnown RBP10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 MYADMQ96S97 322 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 CYP2S1Q96SQ9 504 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 CATSPERBQ9H7T0 1116 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 SMPD4Q9NXE4 827 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 TRMT1Q9NXH9 659 aaKnown RBP10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 COX16Q9P0S2 106 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 STIM2Q9P246 746 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 CFAP97Q9P2B7 532 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 NUDT5Q9UKK9 219 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 FZD10Q9ULW2 581 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 AP4E1Q9UPM8 1137 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 DUSP10Q9Y6W6 482 aa10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 KIF26AQ9ULI4 1882 aaPredicted RBP10.12□□□□□ -0.79
SMARCD1-206ENST00000549274 FAM170AA1A519 330 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 HEPACAM2A8MVW5 462 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 ANHXE9PGG2 379 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 FGF10O15520 208 aaPredicted RBP10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 MSI1O43347 362 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms