RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PCLAFQ15004 111 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 ICA1LQ8NDH6 482 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 STN1Q9H668 368 aaKnown RBP14.15□□□□□ -0.14
HDAC7-228ENST00000548938 RPAP3Q9H6T3 665 aaPredicted RBP14.15□□□□□ -0.14
HDAC7-228ENST00000548938 TMEM134Q9H6X4 195 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 PREBQ9HCU5 417 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 ZNF302Q9NR11 478 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 PACSIN3Q9UKS6 424 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 M0QYV0 167 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 VWA5AO00534 786 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 TPP1O14773 563 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 CASQ2O14958 399 aaPredicted RBP14.15□□□□□ -0.14
HDAC7-228ENST00000548938 MICAL2O94851 1124 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 PENKP01210 267 aaPredicted RBP14.15□□□□□ -0.14
HDAC7-228ENST00000548938 NCF2P19878 526 aaPredicted RBP14.15□□□□□ -0.14
HDAC7-228ENST00000548938 GMPRP36959 345 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 BCAR1P56945 870 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 OSTNP61366 133 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 CNTN2Q02246 1040 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 LRRC39Q96DD0 335 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 PRICKLE1Q96MT3 831 aaPredicted RBP14.15□□□□□ -0.14
HDAC7-228ENST00000548938 NRDE2Q9H7Z3 1164 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 TMCO1Q9UM00 188 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 PCDHGB4Q9UN71 923 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 DTNAQ9Y4J8 743 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 PCDHGB5Q9Y5G0 923 aa14.15□□□□□ -0.14
HDAC7-228ENST00000548938 ATP9BO43861 1147 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PRPSAP2O60256 369 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PLIN3O60664 434 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 CSDE1O75534 798 aaKnown RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 KRT19P08727 400 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PTPRAP18433 802 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 GPD1P21695 349 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 FDFT1P37268 417 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 USP46P62068 366 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 GRM1Q13255 1194 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 SNAPC2Q13487 334 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PDE1CQ14123 709 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 TIFABQ6ZNK6 161 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 RBM44Q6ZP01 1051 aaKnown RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 DPH6Q7L8W6 267 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 KBTBD6Q86V97 674 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 C10orf107Q8IVU9 208 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 FBXW8Q8N3Y1 598 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 NSUN6Q8TEA1 469 aaKnown RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 RXFP2Q8WXD0 754 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PCDHA11Q9Y5I1 949 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 APOL1O14791 398 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 VILLO15195 856 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 DCXO43602 365 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 MSCO60682 206 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 SERPINE1P05121 402 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 ITGA2BP08514 1039 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PDGFRAP16234 1089 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 BACE1P56817 501 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 ACAP1Q15027 740 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 OGFRL1Q5TC84 451 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 ZPBP2Q6X784 338 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 LCA5Q86VQ0 697 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 MCUQ8NE86 351 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PCDH19Q8TAB3 1148 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 CMTM5Q96DZ9 223 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 BTBD9Q96Q07 612 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 CNPY3Q9BT09 278 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 EPB41L1Q9H4G0 881 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 IFT122Q9HBG6 1241 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 MAFBQ9Y5Q3 323 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 F5H423 210 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 ZNF195O14628 629 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 OGTO15294 1046 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 AP1G1O43747 822 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 DDNO94850 711 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 TFAP2AP05549 437 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PMLP29590 882 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 ALDH1A3P47895 512 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 SH3BGRP55822 239 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 CRADDP78560 199 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PTPN11Q06124 597 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 USP4Q13107 963 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PRKG1Q13976 671 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 CA9Q16790 459 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 SNRNP48Q6IEG0 339 aaKnown RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 SCYL2Q6P3W7 929 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 ZNF280CQ8ND82 737 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 UBA3Q8TBC4 463 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PPP4R1Q8TF05 950 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 ITFG2Q969R8 447 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 DCUN1D1Q96GG9 259 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 ELOVL4Q9GZR5 314 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 PICK1Q9NRD5 415 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 DNAJC28Q9NX36 388 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 UBAP1Q9NZ09 502 aa14.14□□□□□ -0.15
HDAC7-228ENST00000548938 CPSF3Q9UKF6 684 aaKnown RBP14.14□□□□□ -0.15
HDAC7-228ENST00000548938 E2F8A0AVK6 867 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 BCLAF3A2AJT9 711 aaKnown RBP14.13□□□□□ -0.15
HDAC7-228ENST00000548938 C2CD4BA6NLJ0 364 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 ADCY6O43306 1168 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 HNRNPRO43390 633 aaKnown RBP14.13□□□□□ -0.15
HDAC7-228ENST00000548938 ZBTB14O43829 449 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms