RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CEP104O60308 925 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 TBX10O75333 385 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 KDELR1P24390 212 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 CDH6P55285 790 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 KRT81Q14533 505 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 COL19A1Q14993 1142 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 PDK2Q15119 407 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 CA9Q16790 459 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 NUGGCQ68CJ6 796 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 MICALL1Q8N3F8 863 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 RNF25Q96BH1 459 aaPredicted RBP29.84■■■□□ 2.37
BRF1-213ENST00000548421 SLC46A2Q9BY10 475 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 CDC23Q9UJX2 597 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 I6L893 689 aaPredicted RBP29.83■■■□□ 2.37
BRF1-213ENST00000548421 CETN2P41208 172 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 ARSEP51690 589 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 COPS2P61201 443 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 SLC7A9P82251 487 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 ITIH3Q06033 890 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 MTA1Q13330 715 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 MAP7D3Q8IWC1 876 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 UNC45BQ8IWX7 931 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 FAM71BQ8TC56 605 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 ZFRQ96KR1 1074 aaKnown RBP29.83■■■□□ 2.37
BRF1-213ENST00000548421 HAPLN3Q96S86 360 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 ADAM7Q9H2U9 754 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 SLC12A6Q9UHW9 1150 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 MRFAP1Q9Y605 127 aa29.83■■■□□ 2.37
BRF1-213ENST00000548421 C3orf70A6NLC5 250 aaPredicted RBP29.82■■■□□ 2.36
BRF1-213ENST00000548421 MOCS2O96007 188 aaPredicted RBP29.82■■■□□ 2.36
BRF1-213ENST00000548421 CEBPBP17676 345 aa29.82■■■□□ 2.36
BRF1-213ENST00000548421 AADACL2Q6P093 401 aa29.82■■■□□ 2.36
BRF1-213ENST00000548421 ATP6V0D2Q8N8Y2 350 aa29.82■■■□□ 2.36
BRF1-213ENST00000548421 PABPC5Q96DU9 382 aaKnown RBP29.82■■■□□ 2.36
BRF1-213ENST00000548421 KCTD15Q96SI1 283 aaPredicted RBP29.82■■■□□ 2.36
BRF1-213ENST00000548421 SLITRK6Q9H5Y7 841 aa29.82■■■□□ 2.36
BRF1-213ENST00000548421 PCDH18Q9HCL0 1135 aa29.82■■■□□ 2.36
BRF1-213ENST00000548421 SMPD4Q9NXE4 827 aa29.82■■■□□ 2.36
BRF1-213ENST00000548421 CPQQ9Y646 472 aa29.82■■■□□ 2.36
BRF1-213ENST00000548421 PAGE1O75459 146 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 L1CAMP32004 1257 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 KCNQ1P51787 676 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 PPP6R3Q5H9R7 873 aaPredicted RBP29.81■■■□□ 2.36
BRF1-213ENST00000548421 MFSD7Q6UXD7 560 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 SPOCD1Q6ZMY3 1216 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 EP400NLQ6ZTU2 488 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 VSIG1Q86XK7 387 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 CREG2Q8IUH2 290 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 CMTM8Q8IZV2 173 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 RASGEF1CQ8N431 466 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 ITFG1Q8TB96 612 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 BTN2A3PQ96KV6 586 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 CAPZA3Q96KX2 299 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 CALN1Q9BXU9 219 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 GKN1Q9NS71 199 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 MTMR10Q9NXD2 777 aa29.81■■■□□ 2.36
BRF1-213ENST00000548421 NUP210Q8TEM1 1887 aaPredicted RBP29.81■■■□□ 2.36
BRF1-213ENST00000548421 STC2O76061 302 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 SLC34A2O95436 690 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 CD48P09326 243 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 AVPR1AP37288 418 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 HARS2P49590 506 aaKnown RBP29.8■■■□□ 2.36
BRF1-213ENST00000548421 DLX2Q07687 328 aaPredicted RBP29.8■■■□□ 2.36
BRF1-213ENST00000548421 DPYSL3Q14195 570 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 CES5AQ6NT32 575 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 PYROXD2Q8N2H3 581 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 ING5Q8WYH8 240 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 MS4A14Q96JA4 679 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 MAGEB5Q9BZ81 275 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 OSBPL2Q9H1P3 480 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 RNF14Q9UBS8 474 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 FSHRP23945 695 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 PTPN7P35236 360 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 CDKN2BP42772 138 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 PPP2R5EQ16537 467 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 TFDP3Q5H9I0 405 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 CCDC181Q5TID7 509 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 ACTRT1Q8TDG2 376 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 ZNF670Q9BS34 389 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 S1PR5Q9H228 398 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 TTC7AQ9ULT0 858 aaPredicted RBP29.8■■■□□ 2.36
BRF1-213ENST00000548421 ARHGAP26Q9UNA1 814 aa29.8■■■□□ 2.36
BRF1-213ENST00000548421 IRF1P10914 325 aa29.79■■■□□ 2.36
BRF1-213ENST00000548421 LTBRP36941 435 aa29.79■■■□□ 2.36
BRF1-213ENST00000548421 TAZQ16635 292 aa29.79■■■□□ 2.36
BRF1-213ENST00000548421 WHAMMP3Q1A5X7 153 aa29.79■■■□□ 2.36
BRF1-213ENST00000548421 ATAT1Q5SQI0 421 aa29.79■■■□□ 2.36
BRF1-213ENST00000548421 ANKS1BQ7Z6G8 1248 aa29.79■■■□□ 2.36
BRF1-213ENST00000548421 OSBPL8Q9BZF1 889 aa29.79■■■□□ 2.36
BRF1-213ENST00000548421 RCOR3Q9P2K3 495 aaPredicted RBP29.79■■■□□ 2.36
BRF1-213ENST00000548421 OR12D3Q9UGF7 316 aa29.79■■■□□ 2.36
BRF1-213ENST00000548421 XPO7Q9UIA9 1087 aaKnown RBP29.79■■■□□ 2.36
BRF1-213ENST00000548421 hCG_1818297A0A087WSY0 165 aa29.78■■■□□ 2.36
BRF1-213ENST00000548421 ZNF487B1APH4 448 aa29.78■■■□□ 2.36
BRF1-213ENST00000548421 PGRMC1O00264 195 aaKnown RBP29.78■■■□□ 2.36
BRF1-213ENST00000548421 ZNF135P52742 658 aaPredicted RBP29.78■■■□□ 2.36
BRF1-213ENST00000548421 CLUL1Q15846 466 aa29.78■■■□□ 2.36
BRF1-213ENST00000548421 ACBD5Q5T8D3 534 aaPredicted RBP29.78■■■□□ 2.36
BRF1-213ENST00000548421 Q7L0L9 218 aa29.78■■■□□ 2.36
BRF1-213ENST00000548421 MYLIPQ8WY64 445 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms