RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CYP4F12Q9HCS2 524 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 UBIAD1Q9Y5Z9 338 aa15.12■□□□□ 0.01
HOXC11-202ENST00000546378 MRPS5P82675 430 aaKnown RBP15.11■□□□□ 0.01
HOXC11-202ENST00000546378 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
HOXC11-202ENST00000546378 PITRM1Q5JRX3 1037 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 MIPOL1Q8TD10 442 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 LRGUKQ96M69 825 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 CDRT15Q96T59 188 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 SNX9Q9Y5X1 595 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 ACTL7BQ9Y614 415 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 ARFGEF1Q9Y6D6 1849 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 PHGDHO43175 533 aaKnown RBP15.11■□□□□ 0.01
HOXC11-202ENST00000546378 POU5F1BQ06416 359 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 FOXD4Q12950 439 aaPredicted RBP15.11■□□□□ 0.01
HOXC11-202ENST00000546378 CAPSQ13938 189 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 ZNF460Q14592 562 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 GEN1Q17RS7 908 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 HABP4Q5JVS0 413 aaKnown RBP15.11■□□□□ 0.01
HOXC11-202ENST00000546378 PDPK2PQ6A1A2 396 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 FRMD7Q6ZUT3 714 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 OR6B3Q8NGW1 331 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 SKA1Q96BD8 255 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 TRIM8Q9BZR9 551 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 VCX3BQ9H321 246 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 ATXN3LQ9H3M9 355 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 SAR1AQ9NR31 198 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 C20orf96Q9NUD7 363 aaPredicted RBP15.11■□□□□ 0.01
HOXC11-202ENST00000546378 EURLQ9NYK6 297 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 PAPSS1O43252 624 aaPredicted RBP15.11■□□□□ 0.01
HOXC11-202ENST00000546378 RTN3O95197 1032 aaPredicted RBP15.11■□□□□ 0.01
HOXC11-202ENST00000546378 CELF2O95319 508 aaKnown RBP15.11■□□□□ 0.01
HOXC11-202ENST00000546378 PRKCBP05771 671 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 HNRNPCP07910 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
HOXC11-202ENST00000546378 HDCP19113 662 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 ENOSF1Q7L5Y1 443 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 GALNT8Q9NY28 637 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 SOX13Q9UN79 622 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 AKT3Q9Y243 479 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 COQ4Q9Y3A0 265 aa15.11■□□□□ 0.01
HOXC11-202ENST00000546378 TM9SF1O15321 606 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 CASP2P42575 452 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 LIN52Q52LA3 116 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 FBXO48Q5FWF7 155 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 AMIGO2Q86SJ2 522 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 VTI1AQ96AJ9 217 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 TXNRD2Q9NNW7 524 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 CACNG4Q9UBN1 327 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 ARHGAP26Q9UNA1 814 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 HBS1LQ9Y450 684 aaKnown RBP15.1■□□□□ 0.01
HOXC11-202ENST00000546378 MICAL2O94851 1124 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 ITGAVP06756 1048 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 ABHD2P08910 425 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 ARL1P40616 181 aaPredicted RBP15.1■□□□□ 0.01
HOXC11-202ENST00000546378 PLIN5Q00G26 463 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 PDK3Q15120 406 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 SLC5A9Q2M3M2 681 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 HSF5Q4G112 596 aaPredicted RBP15.1■□□□□ 0.01
HOXC11-202ENST00000546378 IFNEQ86WN2 208 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 SNX32Q86XE0 403 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 SLC35B2Q8TB61 432 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 SLC44A1Q8WWI5 657 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 SLCO2A1Q92959 643 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 ANKRD36BP1Q96IX9 119 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 SPATC1LQ9H0A9 340 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 LZTS1Q9Y250 596 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 PLLPQ9Y342 182 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 DTNAQ9Y4J8 743 aa15.1■□□□□ 0.01
HOXC11-202ENST00000546378 VTNP04004 478 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 CHRNGP07510 517 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 TBXAS1P24557 533 aaPredicted RBP15.09■□□□□ 0.01
HOXC11-202ENST00000546378 FOLH1Q04609 750 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 PTP4A2Q12974 167 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 PID1Q7Z2X4 250 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 MRPL1Q9BYD6 325 aaKnown RBP15.09■□□□□ 0.01
HOXC11-202ENST00000546378 FAM49AQ9H0Q0 323 aaPredicted RBP15.09■□□□□ 0.01
HOXC11-202ENST00000546378 NMRK2Q9NPI5 230 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 DOLKQ9UPQ8 538 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 RPS6KL1Q9Y6S9 549 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 SSC5DA1L4H1 1573 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 ATP6AP2A0A1C7CYW4 349 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 KIF3CO14782 793 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 ATP6AP2O75787 350 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 MT-ND1P03886 318 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 IRF9Q00978 393 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 HEATR6Q6AI08 1181 aaKnown RBP15.09■□□□□ 0.01
HOXC11-202ENST00000546378 KCNT2Q6UVM3 1135 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 PHF13Q86YI8 300 aaPredicted RBP15.09■□□□□ 0.01
HOXC11-202ENST00000546378 MFN1Q8IWA4 741 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 RYBPQ8N488 228 aaPredicted RBP15.09■□□□□ 0.01
HOXC11-202ENST00000546378 ENDOVQ8N8Q3 282 aaKnown RBP15.09■□□□□ 0.01
HOXC11-202ENST00000546378 ZNF669Q96BR6 464 aaPredicted RBP15.09■□□□□ 0.01
HOXC11-202ENST00000546378 RPL10LQ96L21 214 aaKnown RBP15.09■□□□□ 0.01
HOXC11-202ENST00000546378 KLK14Q9P0G3 267 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 TMEM216Q9P0N5 145 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 SLC39A10Q9ULF5 831 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 STRIP2Q9ULQ0 834 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 KIF13BQ9NQT8 1826 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 TMEM233B4DJY2 109 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 APOL1O14791 398 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 ADCY6O43306 1168 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms