RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 MAB21L3Q8N8X9 362 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 SLC4A11Q8NBS3 891 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 OLIG1Q8TAK6 271 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 WHAMMQ8TF30 809 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 KBTBD7Q8WVZ9 684 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 KAT5Q92993 513 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 FUBP3Q96I24 572 aaKnown RBP eCLIP6.9□□□□□ -1.3
CDCA3-209ENST00000544610 HSFY1Q96LI6 401 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 MMS19Q96T76 1030 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 HNRNPABQ99729 332 aaKnown RBP6.9□□□□□ -1.3
CDCA3-209ENST00000544610 NCAPGQ9BPX3 1015 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 SNX25Q9H3E2 840 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 FBRSL1Q9HCM7 1045 aaKnown RBP6.9□□□□□ -1.3
CDCA3-209ENST00000544610 MRPL47Q9HD33 250 aaKnown RBP6.9□□□□□ -1.3
CDCA3-209ENST00000544610 ABCB6Q9NP58 842 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 VPS45Q9NRW7 570 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 TMLHEQ9NVH6 421 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 UVRAGQ9P2Y5 699 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 GTF3C4Q9UKN8 822 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 L1RE1Q9UN81 338 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.9□□□□□ -1.3
CDCA3-209ENST00000544610 PCDHB5Q9Y5E4 795 aa6.9□□□□□ -1.3
CDCA3-209ENST00000544610 FRYQ5TBA9 3013 aa6.9□□□□□ -1.31
CDCA3-209ENST00000544610 A8MXQ7 604 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 SART1O43290 800 aaKnown RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 KIF5CO60282 957 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 CSH1P0DML2 217 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 CSH2P0DML3 217 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 ARSAP15289 507 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 CHRNB2P17787 502 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 MMP8P22894 467 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 GJA4P35212 333 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 ARHGAP25P42331 645 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 ACADSBP45954 432 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 NSFP46459 744 aaKnown RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 GABRB2P47870 512 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 SERPINB4P48594 390 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 GPR15P49685 360 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 GALK1P51570 392 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 BCAT1P54687 386 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 ETF1P62495 437 aaKnown RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 NOMO3P69849 1222 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 USP4Q13107 963 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 MTF1Q14872 753 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 ACAP1Q15027 740 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 ZNF77Q15935 545 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 NFE2Q16621 373 aaPredicted RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 CFAP221Q4G0U5 840 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 FBXO43Q4G163 708 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 PKDCCQ504Y2 493 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 CCDC122Q5T0U0 273 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 NAIF1Q69YI7 327 aaPredicted RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 TCEAL6Q6IPX3 200 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 CC2D1AQ6P1N0 951 aaPredicted RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 FAM171BQ6P995 826 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 SYT13Q7L8C5 426 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 KIAA1328Q86T90 577 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 ANKMY2Q8IV38 441 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 REXO1L1PQ8IX06 675 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 SYCE1Q8N0S2 351 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 CPA6Q8N4T0 437 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 ANKRD52Q8NB46 1076 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 B3GALNT2Q8NCR0 500 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 C1orf131Q8NDD1 294 aaKnown RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 STKLD1Q8NE28 680 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 TRIM58Q8NG06 486 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 RPLP0P6Q8NHW5 317 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 FNIP1Q8TF40 1166 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 OSCP1Q8WVF1 389 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 CTNNBL1Q8WYA6 563 aaPredicted RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 RFFLQ8WZ73 363 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 ZNF592Q92610 1267 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 MRPS31Q92665 395 aaKnown RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 EZH1Q92800 747 aaPredicted RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 TCEAL3Q969E4 200 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 EXOC4Q96A65 974 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 ACDQ96AP0 544 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 TRMT2BQ96GJ1 504 aaKnown RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 PPP1R13BQ96KQ4 1090 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 MYRFLQ96LU7 910 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 HHIPQ96QV1 700 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 PKMYT1Q99640 499 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 P2RY13Q9BPV8 354 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 SDCBP2Q9H190 292 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 DUSP15Q9H1R2 295 aaPredicted RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 SMOC1Q9H4F8 434 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 SMYD3Q9H7B4 428 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 POLR3BQ9NW08 1133 aaPredicted RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 UXTQ9UBK9 157 aaPredicted RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 HESX1Q9UBX0 185 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 EBF1Q9UH73 591 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 PYCARDQ9ULZ3 195 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 REXO2Q9Y3B8 237 aaKnown RBP6.89□□□□□ -1.31
CDCA3-209ENST00000544610 SCINQ9Y6U3 715 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 GREB1Q4ZG55 1949 aa6.89□□□□□ -1.31
CDCA3-209ENST00000544610 F5P12259 2224 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 OBSL1O75147 1896 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 THAP12O43422 761 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 KCNK5O95279 499 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 APBB3O95704 486 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms