RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 QKIQ96PU8 341 aaKnown RBP eCLIP13.19□□□□□ -0.3
PAAF1-214ENST00000544552 SMOC2Q9H3U7 446 aa13.19□□□□□ -0.3
PAAF1-214ENST00000544552 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.19□□□□□ -0.3
PAAF1-214ENST00000544552 COX16Q9P0S2 106 aa13.19□□□□□ -0.3
PAAF1-214ENST00000544552 ATP11BQ9Y2G3 1177 aa13.19□□□□□ -0.3
PAAF1-214ENST00000544552 KIAA0100Q14667 2235 aaKnown RBP13.19□□□□□ -0.3
PAAF1-214ENST00000544552 ABHD14A-ACY1A0A1B0GW23 586 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 I6L893 689 aaPredicted RBP13.18□□□□□ -0.3
PAAF1-214ENST00000544552 EEF2KO00418 725 aaKnown RBP13.18□□□□□ -0.3
PAAF1-214ENST00000544552 DCLK1O15075 740 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 IRAK2O43187 625 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 HTR7P34969 479 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 ALDH7A1P49419 539 aaKnown RBP13.18□□□□□ -0.3
PAAF1-214ENST00000544552 ARL4CP56559 192 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 STAT4Q14765 748 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 PDK1Q15118 436 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 HIF1AQ16665 826 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 PPP1R21Q6ZMI0 780 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 SCN4BQ8IWT1 228 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 ADAM32Q8TC27 787 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 TFB1MQ8WVM0 346 aaKnown RBP13.18□□□□□ -0.3
PAAF1-214ENST00000544552 VWCEQ96DN2 955 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 SPATA17Q96L03 361 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 CEP295NLQ96MC4 621 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 HAPLN3Q96S86 360 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 CCDC77Q9BR77 488 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 TTPALQ9BTX7 342 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 STMN4Q9H169 189 aaPredicted RBP13.18□□□□□ -0.3
PAAF1-214ENST00000544552 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 ANLNQ9NQW6 1124 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 TMPRSS4Q9NRS4 437 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 TMEM39AQ9NV64 488 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 ETNK2Q9NVF9 386 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 ARHGEF38Q9NXL2 777 aa13.18□□□□□ -0.3
PAAF1-214ENST00000544552 NCAM2O15394 837 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 CREB3O43889 395 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 SHOX2O60902 331 aaPredicted RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 ACSL3O95573 720 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 AGTP01019 485 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 CLTBP09497 229 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 TSHRP16473 764 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 NR1D1P20393 614 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 GLUD2P49448 558 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 KCNJ11Q14654 390 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 PPP2R5DQ14738 602 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 UBAP2Q5T6F2 1119 aaKnown RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 MSANTD2Q6P1R3 559 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 RNF168Q8IYW5 571 aaPredicted RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 PDIK1LQ8N165 341 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 SH2D3CQ8N5H7 860 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 EPAS1Q99814 870 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 FERMT1Q9BQL6 677 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 BRD8Q9H0E9 1235 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 TKTL2Q9H0I9 626 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 OR12D3Q9UGF7 316 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 ZMYND8Q9ULU4 1186 aaPredicted RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 NOVA2Q9UNW9 492 aaKnown RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 MTMR11A4FU01 709 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 CARNS1A5YM72 827 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 FAM72CH0Y354 149 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 RTN3O95197 1032 aaPredicted RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 IVLP07476 585 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 ERCC2P18074 760 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 PSEN1P49768 467 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 TPI1P60174 286 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 BASP1P80723 227 aaKnown RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 AUHQ13825 339 aaKnown RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 PRKD1Q15139 912 aaPredicted RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 DDR2Q16832 855 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 RTP2Q5QGT7 225 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 FAM72AQ5TYM5 149 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 ANKRD22Q5VYY1 191 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 HEATR6Q6AI08 1181 aaKnown RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 FAM72DQ6L9T8 149 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 FAM72BQ86X60 149 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 ATAD1Q8NBU5 361 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 MCUQ8NE86 351 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 HTR3CQ8WXA8 447 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 TOP1MTQ969P6 601 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 C9orf72Q96LT7 481 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 HTATIP2Q9BUP3 242 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 KLC2Q9H0B6 622 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 CENPHQ9H3R5 247 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 CWH43Q9H720 699 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 PPCSQ9HAB8 311 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 CLIC5Q9NZA1 410 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 HCSTQ9UBK5 93 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 XPO7Q9UIA9 1087 aaKnown RBP13.17□□□□□ -0.3
PAAF1-214ENST00000544552 BACE2Q9Y5Z0 518 aa13.17□□□□□ -0.3
PAAF1-214ENST00000544552 A0A087WUV0 522 aaPredicted RBP13.16□□□□□ -0.3
PAAF1-214ENST00000544552 NT5C1B-RDH14C9J2C7 533 aa13.16□□□□□ -0.3
PAAF1-214ENST00000544552 E7EVH7 732 aa13.16□□□□□ -0.3
PAAF1-214ENST00000544552 PPP1R12AO14974 1030 aaPredicted RBP13.16□□□□□ -0.3
PAAF1-214ENST00000544552 RGS16O15492 202 aaPredicted RBP13.16□□□□□ -0.3
PAAF1-214ENST00000544552 MFSD11O43934 449 aa13.16□□□□□ -0.3
PAAF1-214ENST00000544552 EFCAB14O75071 495 aa13.16□□□□□ -0.3
PAAF1-214ENST00000544552 TMEM63AO94886 807 aa13.16□□□□□ -0.3
PAAF1-214ENST00000544552 HAPLN1P10915 354 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms