RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SRFP11831 508 aa15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 CHKAP35790 457 aa15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 NOP2P46087 812 aaKnown RBP15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 CXCR3P49682 368 aa15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 PIGHQ14442 188 aaPredicted RBP15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 PPP2R5DQ14738 602 aa15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 RAB6CQ53S08 254 aa15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 BRMS1LQ5PSV4 323 aa15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 SCYL2Q6P3W7 929 aa15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 BNIPLQ7Z465 357 aa15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 CSGALNACT1Q8TDX6 532 aa15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 CENPIQ92674 756 aaPredicted RBP15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 ZNF830Q96NB3 372 aaPredicted RBP15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 DDX50Q9BQ39 737 aaKnown RBP15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 FAM83CQ9BQN1 747 aa15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 RAB6CQ9H0N0 254 aa15.03■□□□□ -0
TNFRSF1A-216ENST00000543995 TMEM110-MUSTN1A8MSY1 372 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 KCNU1A8MYU2 1149 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 ACSL4O60488 711 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 SLC34A2O95436 690 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 NFATC1O95644 943 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 LATS1O95835 1130 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 ARSAP15289 507 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 HDAC4P56524 1084 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 PFKPQ01813 784 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 TNK2Q07912 1038 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 ZNF252P-AS1Q0IIN9 211 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 EML3Q32P44 896 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 ARL13BQ3SXY8 428 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 ADGRG2Q8IZP9 1017 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 CPA6Q8N4T0 437 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 TTC8Q8TAM2 541 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 AZIN2Q96A70 460 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 BTN2A3PQ96KV6 586 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 PPP1R9BQ96SB3 815 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 GTSE1Q9NYZ3 720 aa15.02■□□□□ -0
TNFRSF1A-216ENST00000543995 RCCD1A6NED2 376 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PAGE1O75459 146 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 CCDC175P0C221 793 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 VCPP55072 806 aaKnown RBP15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 NAP1L1P55209 391 aaKnown RBP15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 KIF5AQ12840 1032 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 NR1H3Q13133 447 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MTA1Q13330 715 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 RUNX3Q13761 415 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MESDQ14696 234 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ACAP1Q15027 740 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ANO4Q32M45 955 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ITPRIPL2Q3MIP1 535 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ADGRF1Q5T601 910 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TPGS1Q6ZTW0 290 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 DNASE1L2Q92874 299 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 NCAPGQ9BPX3 1015 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ECT2Q9H8V3 914 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 HPS4Q9NQG7 708 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SLC2A4RGQ9NR83 387 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ARHGEF38Q9NXL2 777 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 XPO7Q9UIA9 1087 aaKnown RBP15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 LCMT1Q9UIC8 334 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ADGRG1Q9Y653 693 aa15.02□□□□□ -0.01
TNFRSF1A-216ENST00000543995 GOLGA6L7A0A1B0GV03 622 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ADH1CP00326 375 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SSR1P43307 286 aaKnown RBP15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 DHCR24Q15392 516 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 RAP1GAP2Q684P5 730 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 UBALD2Q8IYN6 164 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 NIPA2Q8N8Q9 360 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SIK2Q9H0K1 926 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TMPRSS4Q9NRS4 437 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PCSK1NQ9UHG2 260 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 STOML2Q9UJZ1 356 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 FBXL21Q9UKT6 434 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MYOFQ9NZM1 2061 aa15.01□□□□□ -0.01
TNFRSF1A-216ENST00000543995 A0A0A6YYK5 440 aaPredicted RBP15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ARNTLO00327 626 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TRDMT1O14717 391 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PJA2O43164 708 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 BUB1O43683 1085 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PRPSAP2O60256 369 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 LRCH4O75427 683 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MTA2O94776 668 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 CYBBP04839 570 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 CYP17A1P05093 508 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ARHGAP25P42331 645 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TCEAL1Q15170 157 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 FAM133BQ5BKY9 247 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 LY6G5CQ5SRR4 150 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 DAB2IPQ5VWQ8 1189 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 NADSYN1Q6IA69 706 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 RFWD3Q6PCD5 774 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SLFN11Q7Z7L1 901 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 CHSY1Q86X52 802 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 CPXM2Q8N436 756 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 CCDC185Q8N715 623 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 BHMTQ93088 406 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 LACRTQ9GZZ8 138 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 KCNF1Q9H3M0 494 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TRPV5Q9NQA5 729 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ANLNQ9NQW6 1124 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SPHK2Q9NRA0 654 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms