RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 ARHGAP44Q17R89 818 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 VWA3BQ502W6 1294 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SYPL2Q5VXT5 272 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 NADSYN1Q6IA69 706 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TCEAL6Q6IPX3 200 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 RBM43Q6ZSC3 357 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 KIAA0907Q7Z7F0 614 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CHPFQ8IZ52 775 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 DQX1Q8TE96 717 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 DDI1Q8WTU0 396 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TCEAL3Q969E4 200 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 FCRL2Q96LA5 508 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 RTKNQ9BST9 563 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 NDST4Q9H3R1 872 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 VPS45Q9NRW7 570 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SAMSN1Q9NSI8 373 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TJP2Q9UDY2 1190 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CDV3Q9UKY7 258 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 NAALADL1Q9UQQ1 740 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 RAD54BQ9Y620 910 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CKAP5Q14008 2032 aa13.66□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CEP192Q8TEP8 1941 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 GOLGA6L7A0A1B0GV03 622 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 DCDC2BA2VCK2 349 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 E5RJQ4 531 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 FOXN3O00409 490 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TSPAN3O60637 253 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CAVIN2O95810 425 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 IGLV3-25P01717 112 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 NCAM1P13591 858 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 NDUFV2P19404 249 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 HLA-FP30511 346 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SLC6A4P31645 630 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 GBP1P32455 592 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 IL12RB1P42701 662 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ACADSBP45954 432 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CREB5Q02930 508 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 PDCLQ13371 301 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 NNTQ13423 1086 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TAF5Q15542 800 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MPPE1Q53F39 396 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CT47A1Q5JQC4 288 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SPDYCQ5MJ68 293 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 PIK3R6Q5UE93 754 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ANKS1BQ7Z6G8 1248 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MYEOVQ96EZ4 313 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 LMLNQ96KR4 655 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 MRGPRX1Q96LB2 322 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 TUBGCP2Q9BSJ2 902 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 IRX2Q9BZI1 471 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 SLC6A17Q9H1V8 727 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ST7Q9NRC1 585 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ELOVL2Q9NXB9 296 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 CALCOCO1Q9P1Z2 691 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 BCCIPQ9P287 314 aaKnown RBP eCLIP13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 PCDHGC3Q9UN70 934 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 STON1Q9Y6Q2 735 aa13.65□□□□□ -0.22
TNFRSF1A-215ENST00000543359 ASPMQ8IZT6 3477 aa13.65□□□□□ -0.23
TNFRSF1A-215ENST00000543359 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 THAP12O43422 761 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 MED7O43513 233 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ACSL4O60488 711 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CYBBP04839 570 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PNMA6AP0CW24 399 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 C7P10643 843 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PTGER3P43115 390 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TBX4P57082 545 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ZNF445P59923 1031 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 HSP90AA4PQ58FG1 418 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 NUGGCQ68CJ6 796 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SDE2Q6IQ49 451 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 RFWD3Q6PCD5 774 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TAC4Q86UU9 113 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ADIPOR2Q86V24 386 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SLC47A2Q86VL8 602 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 UNC45BQ8IWX7 931 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TMEFF1Q8IYR6 380 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 FAM71AQ8IYT1 594 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ADAM32Q8TC27 787 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 WFDC5Q8TCV5 224 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SORCS1Q8WY21 1168 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 ERLEC1Q96DZ1 483 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TMA16Q96EY4 203 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CPXM1Q96SM3 734 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 NAA15Q9BXJ9 866 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 LHX5Q9H2C1 402 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CD93Q9NPY3 652 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TMEM74BQ9NUR3 256 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 DNAJC12Q9UKB3 198 aa13.64□□□□□ -0.23
TNFRSF1A-215ENST00000543359 MUC22E2RYF6 1773 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 CACNA1EQ15878 2313 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 FRYQ5TBA9 3013 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 IGHV1OR15-9A0A0B4J2B8 117 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 NPC1O15118 1278 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 SART1O43290 800 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 TIMM44O43615 452 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 USP8P40818 1118 aa13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 YWHAZP63104 245 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-215ENST00000543359 PITX1P78337 314 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms