RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 C7orf26Q96N11 449 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 PARK7Q99497 189 aaKnown RBP19.22■□□□□ 0.67
COPS7A-215ENST00000543155 HNRNPABQ99729 332 aaKnown RBP19.22■□□□□ 0.67
COPS7A-215ENST00000543155 TRIM56Q9BRZ2 755 aaKnown RBP19.22■□□□□ 0.67
COPS7A-215ENST00000543155 GOLGA2P5Q9HBQ8 144 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 EIF2B3Q9NR50 452 aaKnown RBP19.22■□□□□ 0.67
COPS7A-215ENST00000543155 ARHGEF4Q9NR80 690 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 H3BRJ5 948 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 MFSD11O43934 449 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 YBX3P16989 372 aaKnown RBP eCLIP19.22■□□□□ 0.67
COPS7A-215ENST00000543155 SERPINB3P29508 390 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 GRIA1P42261 906 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 ZBTB16Q05516 673 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 FAM110CQ1W6H9 321 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 OSTM1Q86WC4 334 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 RAB3IL1Q8TBN0 382 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 FAM149B1Q96BN6 582 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 PTCD3Q96EY7 689 aaKnown RBP19.22■□□□□ 0.67
COPS7A-215ENST00000543155 OXNAD1Q96HP4 312 aaPredicted RBP19.22■□□□□ 0.67
COPS7A-215ENST00000543155 DUSP16Q9BY84 665 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 SLC13A1Q9BZW2 595 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 RNF39Q9H2S5 420 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 PCMTD2Q9NV79 361 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 MOCS1Q9NZB8 636 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 SIRPGQ9P1W8 387 aa19.22■□□□□ 0.67
COPS7A-215ENST00000543155 SF3B1O75533 1304 aaKnown RBP eCLIP19.21■□□□□ 0.678e-6■■■■■ 107
COPS7A-215ENST00000543155 CRHR1P34998 444 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 WASHC2DQ5SRD0 308 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 OTUD1Q5VV17 481 aaPredicted RBP19.21■□□□□ 0.67
COPS7A-215ENST00000543155 TIFABQ6ZNK6 161 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 NSMCE1Q8WV22 266 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 E2F7Q96AV8 911 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 LGMNQ99538 433 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 FERMT1Q9BQL6 677 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 GNEQ9Y223 722 aaKnown RBP19.21■□□□□ 0.67
COPS7A-215ENST00000543155 CCDC22O60826 627 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 OPHN1O60890 802 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 ALDH1A2O94788 518 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 MYL2P10916 166 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 ELF1P32519 619 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 NOS2P35228 1153 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 ADAM17P78536 824 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 TMPRSS15P98073 1019 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 HIC1Q14526 733 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 KRT72Q14CN4 511 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 DCAF6Q58WW2 860 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 LRRC8BQ6P9F7 803 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 MARK2Q7KZI7 788 aaKnown RBP19.21■□□□□ 0.67
COPS7A-215ENST00000543155 NDUFAF2Q8N183 169 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 COLGALT1Q8NBJ5 622 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 RNF139Q8WU17 664 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 NSL1Q96IY1 281 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 RSRC1Q96IZ7 334 aaKnown RBP19.21■□□□□ 0.67
COPS7A-215ENST00000543155 MECRQ9BV79 373 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 ARL8BQ9NVJ2 186 aa19.21■□□□□ 0.67
COPS7A-215ENST00000543155 TSC2P49815 1807 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 WDR27A2RRH5 827 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 HMX2A2RU54 273 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 NPR3P17342 541 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 GLUD2P49448 558 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 PSEN2P49810 448 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 LILRA4P59901 499 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 BST1Q10588 318 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 MROH9Q5TGP6 573 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 FAM91A1Q658Y4 838 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 BNIPLQ7Z465 357 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 KCTD13Q8WZ19 329 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 N4BP2L2Q92802 583 aaPredicted RBP19.2■□□□□ 0.66
COPS7A-215ENST00000543155 NT5C3BQ969T7 300 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 MYCBPQ99417 103 aaPredicted RBP19.2■□□□□ 0.66
COPS7A-215ENST00000543155 RNPEPL1Q9HAU8 725 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 KCNK4Q9NYG8 393 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 STAP1Q9ULZ2 295 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 IPPQ9Y573 584 aa19.2■□□□□ 0.66
COPS7A-215ENST00000543155 SDR42E2A6NKP2 422 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 RNF103O00237 685 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 BIRC5O15392 142 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 PEX11AO75192 247 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 AP1B1Q10567 949 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 PDK1Q15118 436 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 TEX44Q53QW1 395 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 TLK2Q86UE8 772 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 CCNJLQ8IV13 435 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 NUDCD3Q8IVD9 361 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.19■□□□□ 0.66
COPS7A-215ENST00000543155 SH3TC2Q8TF17 1288 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 NDRG1Q92597 394 aaKnown RBP19.19■□□□□ 0.66
COPS7A-215ENST00000543155 NPY6RQ99463 290 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 FBXO6Q9NRD1 293 aaPredicted RBP19.19■□□□□ 0.66
COPS7A-215ENST00000543155 NR2E3Q9Y5X4 410 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 ZNF638Q14966 1978 aaKnown RBP19.19■□□□□ 0.66
COPS7A-215ENST00000543155 DIAPH2O60879 1101 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 CALB2P22676 271 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 CDK18Q07002 472 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 NIPAL4Q0D2K0 466 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 NAB1Q13506 487 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 IRF5Q13568 498 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 CHI3L2Q15782 390 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 CASC4Q6P4E1 433 aa19.19■□□□□ 0.66
COPS7A-215ENST00000543155 SMG8Q8ND04 991 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms