RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 WDCPQ9H6R7 721 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 GRPEL1Q9HAV7 217 aa19.51■□□□□ 0.71
VPS33A-205ENST00000541169 CNOT8Q9UFF9 292 aaKnown RBP19.51■□□□□ 0.71
VPS33A-205ENST00000541169 TYW5A2RUC4 315 aaKnown RBP19.5■□□□□ 0.71
VPS33A-205ENST00000541169 KRBA1A5PL33 1030 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 KCNU1A8MYU2 1149 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 ACSL4O60488 711 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 CYP17A1P05093 508 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 ARSAP15289 507 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 GPD1P21695 349 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 FECHP22830 423 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 RFC1P35251 1148 aaPredicted RBP19.5■□□□□ 0.71
VPS33A-205ENST00000541169 CXCR3P49682 368 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 NME3Q13232 169 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 ACAP1Q15027 740 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 RHBDF2Q6PJF5 856 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 BNIPLQ7Z465 357 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 ADAM32Q8TC27 787 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 RXFP2Q8WXD0 754 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 CENPIQ92674 756 aaPredicted RBP19.5■□□□□ 0.71
VPS33A-205ENST00000541169 ANP32BQ92688 251 aaKnown RBP19.5■□□□□ 0.71
VPS33A-205ENST00000541169 PBXIP1Q96AQ6 731 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 CNPY3Q9BT09 278 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 INTUQ9ULD6 942 aa19.5■□□□□ 0.71
VPS33A-205ENST00000541169 TRDMT1O14717 391 aaKnown RBP19.49■□□□□ 0.71
VPS33A-205ENST00000541169 IPO7O95373 1038 aaKnown RBP19.49■□□□□ 0.71
VPS33A-205ENST00000541169 GJA4P35212 333 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 CYLC1P35663 651 aaPredicted RBP19.49■□□□□ 0.71
VPS33A-205ENST00000541169 AIF1P55008 147 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 GRSF1Q12849 480 aaKnown RBP eCLIP19.49■□□□□ 0.71
VPS33A-205ENST00000541169 E2F5Q15329 346 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 ARL13BQ3SXY8 428 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 MPPE1Q53F39 396 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 TMEM31Q5JXX7 168 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 LY6G5CQ5SRR4 150 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 SYNPOQ8N3V7 929 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 CTNNBL1Q8WYA6 563 aaPredicted RBP19.49■□□□□ 0.71
VPS33A-205ENST00000541169 CFAP57Q96MR6 1250 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 MCEEQ96PE7 176 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 IER2Q9BTL4 223 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 SLC2A11Q9BYW1 496 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 TBC1D17Q9HA65 648 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 NENFQ9UMX5 172 aa19.49■□□□□ 0.71
VPS33A-205ENST00000541169 STK25O00506 426 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 CACNG3O60359 315 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 H2AFZP0C0S5 128 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 DRD1P21728 446 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 MRE11P49959 708 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 NUBP1P53384 320 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 GFPT1Q06210 699 aaPredicted RBP19.48■□□□□ 0.71
VPS33A-205ENST00000541169 LRRC32Q14392 662 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 SPA17Q15506 151 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 ANO4Q32M45 955 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 CCDC14Q49A88 953 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 FBXO43Q4G163 708 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 ZC3H12AQ5D1E8 599 aaKnown RBP19.48■□□□□ 0.71
VPS33A-205ENST00000541169 DGKKQ5KSL6 1271 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 TTC39BQ5VTQ0 682 aaPredicted RBP19.48■□□□□ 0.71
VPS33A-205ENST00000541169 H2AFVQ71UI9 128 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 FBXL6Q8N531 539 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 C1orf74Q96LT6 269 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 TBCBQ99426 244 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 CHP1Q99653 195 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 P2RY13Q9BPV8 354 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 BBS2Q9BXC9 721 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 ARHGEF38Q9NXL2 777 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 UVRAGQ9P2Y5 699 aa19.48■□□□□ 0.71
VPS33A-205ENST00000541169 TMEM191CA6NGB0 347 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 OTOL1A6NHN0 477 aaPredicted RBP19.47■□□□□ 0.71
VPS33A-205ENST00000541169 RNF8O76064 485 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 PENKP01210 267 aaPredicted RBP19.47■□□□□ 0.71
VPS33A-205ENST00000541169 CYP1A2P05177 515 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 TMEM253P0C7T8 217 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 ASTLQ6HA08 431 aaPredicted RBP19.47■□□□□ 0.71
VPS33A-205ENST00000541169 TMEM25Q86YD3 366 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 CCDC117Q8IWD4 279 aaPredicted RBP19.47■□□□□ 0.71
VPS33A-205ENST00000541169 TXLNBQ8N3L3 684 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 EMC1Q8N766 993 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 CD101Q93033 1021 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 WBP2Q969T9 261 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 TMA16Q96EY4 203 aaKnown RBP19.47■□□□□ 0.71
VPS33A-205ENST00000541169 HAPLN3Q96S86 360 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 RETREG1Q9H6L5 497 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 LTB4R2Q9NPC1 389 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 PIGVQ9NUD9 493 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 SIT1Q9Y3P8 196 aa19.47■□□□□ 0.71
VPS33A-205ENST00000541169 TECTAO75443 2155 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 LCA5LO95447 670 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 TYRP14679 529 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 AOC1P19801 751 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 RPS9P46781 194 aaKnown RBP19.46■□□□□ 0.71
VPS33A-205ENST00000541169 GALCP54803 685 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 RPL7AP62424 266 aaKnown RBP19.46■□□□□ 0.71
VPS33A-205ENST00000541169 PIGHQ14442 188 aaPredicted RBP19.46■□□□□ 0.71
VPS33A-205ENST00000541169 TMEM196Q5HYL7 178 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 RABGAP1LQ5R372 815 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 HJURPQ8NCD3 748 aaPredicted RBP19.46■□□□□ 0.71
VPS33A-205ENST00000541169 PJA1Q8NG27 643 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 JOSD2Q8TAC2 188 aa19.46■□□□□ 0.71
VPS33A-205ENST00000541169 DDI1Q8WTU0 396 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms