RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	ACSL4	O60488	711 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	TGM1	P22735	817 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	SNX16	P57768	344 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	TAF5	Q15542	800 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	GEN1	Q17RS7	908 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	PLK5	Q496M5	336 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	ANKS1B	Q7Z6G8	1248 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	TAC4	Q86UU9	113 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	PGBD3	Q8N328	593 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	UCMA	Q8WVF2	138 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	AZIN2	Q96A70	460 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	LOXL4	Q96JB6	756 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	ZC3H10	Q96K80	434 aa	Known RBP	20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	STK33	Q9BYT3	514 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	TLR6	Q9Y2C9	796 aa		20.71	■□□□□ 0.91
RAP1B-222	ENST00000540781	LRP3	O75074	770 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	CYP11B1	P15538	503 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	HOXD9	P28356	352 aa	Predicted RBP	20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	GBP1	P32455	592 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	COPB1	P53618	953 aa	Known RBP	20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	TYRO3	Q06418	890 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	NNT	Q13423	1086 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	ELF2	Q15723	593 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	EFHC1	Q5JVL4	640 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	OR6B2	Q6IFH4	312 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	RFWD3	Q6PCD5	774 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	IPO4	Q8TEX9	1081 aa	Known RBP	20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	SLC39A13	Q96H72	371 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	DDX50	Q9BQ39	737 aa	Known RBP	20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	IRX2	Q9BZI1	471 aa	Predicted RBP	20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	DUSP15	Q9H1R2	295 aa	Predicted RBP	20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	SYNC	Q9H7C4	482 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	ASNSD1	Q9NWL6	643 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	CACNA2D2	Q9NY47	1150 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	LIMA1	Q9UHB6	759 aa	Known RBP	20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	RALGAPA1	Q6GYQ0	2036 aa		20.7	■□□□□ 0.9
RAP1B-222	ENST00000540781	CEP250	Q9BV73	2442 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	CFAP54	Q96N23	3096 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	RHOBTB1	O94844	696 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	EPN2	O95208	641 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	TRUB2	O95900	331 aa	Known RBP	20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	GLI1	P08151	1106 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	CDK11B	P21127	795 aa	Known RBP	20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	ID4	P47928	161 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	KLK7	P49862	253 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	FAM133B	Q5BKY9	247 aa	Known RBP	20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	PIK3R6	Q5UE93	754 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	TAF3	Q5VWG9	929 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	C11orf74	Q86VG3	221 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	DEFB106A	Q8N104	65 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	TMEM35B	Q8NCS4	154 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	OLIG1	Q8TAK6	271 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	GABRG3	Q99928	467 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	GAN	Q9H2C0	597 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	ARRDC1-AS1	Q9H2J1	176 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781	SEMA4G	Q9NTN9	838 aa		20.69	■□□□□ 0.9
RAP1B-222	ENST00000540781		A0A1W2PQF6	199 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781		F8VZ95	297 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	ZBTB24	O43167	697 aa	Predicted RBP	20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	IRAK2	O43187	625 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	TBL1X	O60907	577 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	HSF2BP	O75031	334 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	MOCS2	O96007	188 aa	Predicted RBP	20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	APOE	P02649	317 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	ERBB2	P04626	1255 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	SLC6A4	P31645	630 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	SGSH	P51688	502 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	CDK17	Q00537	523 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	LMNB2	Q03252	620 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	CSRP2	Q16527	193 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	PTPN20	Q4JDL3	420 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	DCAF6	Q58WW2	860 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	NADSYN1	Q6IA69	706 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	FAM183BP	Q6ZVS7	135 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	RLN3	Q8WXF3	142 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	ERLEC1	Q96DZ1	483 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	SLC2A13	Q96QE2	648 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	CIPC	Q9C0C6	399 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	FAM207A	Q9NSI2	230 aa	Predicted RBP	20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	ELOVL2	Q9NXB9	296 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	THAP10	Q9P2Z0	257 aa	Predicted RBP	20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	RAD54B	Q9Y620	910 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	STON1	Q9Y6Q2	735 aa		20.68	■□□□□ 0.9
RAP1B-222	ENST00000540781	WASH3P	C4AMC7	463 aa		20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	NPC1	O15118	1278 aa		20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	GRAP2	O75791	330 aa		20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	GABRG2	P18507	467 aa		20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	P2RY2	P41231	377 aa		20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	POLR2F	P61218	127 aa	Known RBP	20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	PITX1	P78337	314 aa	Predicted RBP	20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	SLC6A3	Q01959	620 aa		20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	BYSL	Q13895	437 aa	Known RBP	20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	NCAPH	Q15003	741 aa		20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	EIF4H	Q15056	248 aa	Known RBP	20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	E2F5	Q15329	346 aa		20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	ZC3H12A	Q5D1E8	599 aa	Known RBP	20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	MPP7	Q5T2T1	576 aa		20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	KIAA1211L	Q6NV74	962 aa		20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	ABCA7	Q8IZY2	2146 aa		20.67	■□□□□ 0.9
RAP1B-222	ENST00000540781	AOPEP	Q8N6M6	819 aa		20.67	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms