RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 OR2T3Q8NH03 318 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 SETD7Q8WTS6 366 aaKnown RBP7.66□□□□□ -1.18
YBX3-209ENST00000540747 UCMAQ8WVF2 138 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 PRCCQ92733 491 aaPredicted RBP7.66□□□□□ -1.18
YBX3-209ENST00000540747 IGSF8Q969P0 613 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 CYFIP2Q96F07 1278 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 INTS4Q96HW7 963 aaKnown RBP7.66□□□□□ -1.18
YBX3-209ENST00000540747 LRIG1Q96JA1 1093 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 CDK5RAP1Q96SZ6 601 aaKnown RBP7.66□□□□□ -1.18
YBX3-209ENST00000540747 DUSP16Q9BY84 665 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 DCLK3Q9C098 648 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 MIR1-1HGQ9H1L0 117 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 BLZF1Q9H2G9 400 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 ZSCAN16Q9H4T2 348 aaPredicted RBP7.66□□□□□ -1.18
YBX3-209ENST00000540747 CYP3A43Q9HB55 503 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 TM9SF3Q9HD45 589 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 STOML2Q9UJZ1 356 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 NAGPAQ9UK23 515 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 SNX11Q9Y5W9 270 aa7.66□□□□□ -1.18
YBX3-209ENST00000540747 COL5A1P20908 1838 aaPredicted RBP7.66□□□□□ -1.18
YBX3-209ENST00000540747 H0Y8X5 98 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 PDXKO00764 312 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 MAPK13O15264 365 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 POLR2DO15514 142 aaKnown RBP7.65□□□□□ -1.18
YBX3-209ENST00000540747 TIMM44O43615 452 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 STX6O43752 255 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 SYNCRIPO60506 623 aaKnown RBP7.65□□□□□ -1.18
YBX3-209ENST00000540747 NR3C1P04150 777 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 IGHV4-34P06331 123 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 EPHX1P07099 455 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 HLA-EP13747 358 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 HLA-FP30511 346 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 GRK6P43250 576 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 COG7P83436 770 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 ZBTB16Q05516 673 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 ENPEPQ07075 957 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 E2F5Q15329 346 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 TRIP4Q15650 581 aaPredicted RBP7.65□□□□□ -1.18
YBX3-209ENST00000540747 PPP1R26Q5T8A7 1209 aaPredicted RBP7.65□□□□□ -1.18
YBX3-209ENST00000540747 PM20D1Q6GTS8 502 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 LAYNQ6UX15 382 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 TADA2BQ86TJ2 420 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 ADIPOR2Q86V24 386 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 PDCD7Q8N8D1 485 aaKnown RBP7.65□□□□□ -1.18
YBX3-209ENST00000540747 ARID1BQ8NFD5 2236 aaPredicted RBP7.65□□□□□ -1.18
YBX3-209ENST00000540747 TAS1R2Q8TE23 839 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 RHBDD1Q8TEB9 315 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 JAKMIP2Q96AA8 810 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 BIRC7Q96CA5 298 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 LMLNQ96KR4 655 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 NT5C1AQ9BXI3 368 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 UBXN6Q9BZV1 441 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 NIF3L1Q9GZT8 377 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 LHX5Q9H2C1 402 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 FBRSQ9HAH7 460 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.65□□□□□ -1.18
YBX3-209ENST00000540747 ANKRD6Q9Y2G4 727 aa7.65□□□□□ -1.18
YBX3-209ENST00000540747 HECTD1Q9ULT8 2610 aa7.65□□□□□ -1.19
YBX3-209ENST00000540747 MYH10P35580 1976 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 MYO18BQ8IUG5 2567 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 A0A1B0GTQ1 180 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 FAM149AA5PLN7 773 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 ACTN4O43707 911 aaKnown RBP7.64□□□□□ -1.19
YBX3-209ENST00000540747 SEMA4FO95754 770 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 RALAP11233 206 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 CD27P26842 260 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 CCT8P50990 548 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 RPS14P62263 151 aaKnown RBP7.64□□□□□ -1.19
YBX3-209ENST00000540747 PPP3CAQ08209 521 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 EFEMP1Q12805 493 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 SUZ12Q15022 739 aaKnown RBP7.64□□□□□ -1.19
YBX3-209ENST00000540747 SHBQ15464 509 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 NFIL3Q16649 462 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 RESP18Q5W5W9 173 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 ARHGAP17Q68EM7 881 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 SERPINA13PQ6UXR4 307 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 FAM124AQ86V42 546 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 PIGZQ86VD9 579 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 TMPRSS12Q86WS5 348 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 CACUL1Q86Y37 369 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 DENND1CQ8IV53 801 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 GRAMD1CQ8IYS0 662 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 SLC4A11Q8NBS3 891 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 WFIKKN2Q8TEU8 576 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 PLD4Q96BZ4 506 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 MYO19Q96H55 970 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 FAXDC2Q96IV6 333 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 UBL7Q96S82 380 aaPredicted RBP7.64□□□□□ -1.19
YBX3-209ENST00000540747 CIPCQ9C0C6 399 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 PRORYQ9H606 182 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 PRSS16Q9NQE7 514 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 MARCH2Q9P0N8 246 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 RASAL2Q9UJF2 1139 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 TRAF3IP3Q9Y228 551 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 PCDHGA1Q9Y5H4 931 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 TMEM131Q92545 1883 aa7.64□□□□□ -1.19
YBX3-209ENST00000540747 COL6A6A6NMZ7 2263 aa7.63□□□□□ -1.19
YBX3-209ENST00000540747 A0A1W2PR77 199 aa7.63□□□□□ -1.19
YBX3-209ENST00000540747 SLC12A8A0AV02 714 aa7.63□□□□□ -1.19
YBX3-209ENST00000540747 TK2O00142 265 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms