RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 DNAJC21Q5F1R6 531 aaKnown RBP8.59□□□□□ -1.03
C2CD3-215ENST00000540452 PPP6R3Q5H9R7 873 aaPredicted RBP8.59□□□□□ -1.03
C2CD3-215ENST00000540452 VARS2Q5ST30 1063 aaKnown RBP8.59□□□□□ -1.03
C2CD3-215ENST00000540452 NCBP2-AS2Q69YL0 99 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 HEATR6Q6AI08 1181 aaKnown RBP8.59□□□□□ -1.03
C2CD3-215ENST00000540452 FUT10Q6P4F1 479 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 FBXO46Q6PJ61 603 aaPredicted RBP8.59□□□□□ -1.03
C2CD3-215ENST00000540452 LEKR1Q6ZMV7 388 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 RFX8Q6ZV50 586 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 CTU1Q7Z7A3 348 aaKnown RBP8.59□□□□□ -1.03
C2CD3-215ENST00000540452 TADA2BQ86TJ2 420 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 LRRTM3Q86VH5 581 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 FAM131BQ86XD5 332 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 UNC45BQ8IWX7 931 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 RNF168Q8IYW5 571 aaPredicted RBP8.59□□□□□ -1.03
C2CD3-215ENST00000540452 VPS52Q8N1B4 723 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 NUP93Q8N1F7 819 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 CCDC185Q8N715 623 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 SLC7A14Q8TBB6 771 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 SH3TC2Q8TF17 1288 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 TFB1MQ8WVM0 346 aaKnown RBP8.59□□□□□ -1.03
C2CD3-215ENST00000540452 ARL8AQ96BM9 186 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 HDAC11Q96DB2 347 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 C1orf74Q96LT6 269 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 DEFB118Q96PH6 123 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 KCNK16Q96T55 309 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 LPIN3Q9BQK8 851 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 TTLL2Q9BWV7 592 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 CAPS2Q9BXY5 557 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 WDCPQ9H6R7 721 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 SSU72Q9NP77 194 aaKnown RBP8.59□□□□□ -1.03
C2CD3-215ENST00000540452 PIGVQ9NUD9 493 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 TMEM30AQ9NV96 361 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 DDIT4Q9NX09 232 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 NINJ2Q9NZG7 142 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 DTLQ9NZJ0 730 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 SLC12A6Q9UHW9 1150 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 TRHDEQ9UKU6 1024 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 ZMYND8Q9ULU4 1186 aaPredicted RBP8.59□□□□□ -1.03
C2CD3-215ENST00000540452 TLR6Q9Y2C9 796 aa8.59□□□□□ -1.03
C2CD3-215ENST00000540452 TIMM13Q9Y5L4 95 aaPredicted RBP8.59□□□□□ -1.03
C2CD3-215ENST00000540452 SCN5AQ14524 2016 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.58□□□□□ -1.04
C2CD3-215ENST00000540452 WASH4PA8MWX3 477 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 EEF2KO00418 725 aaKnown RBP8.58□□□□□ -1.04
C2CD3-215ENST00000540452 TRDMT1O14717 391 aaKnown RBP8.58□□□□□ -1.04
C2CD3-215ENST00000540452 PSMD3O43242 534 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 BAIAP3O94812 1187 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 ITGB1P05556 798 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 GALTP07902 379 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 USP17L7P0C7H9 530 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 TFE3P19532 575 aaPredicted RBP8.58□□□□□ -1.04
C2CD3-215ENST00000540452 CHKAP35790 457 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 GRIK1P39086 918 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 MAGEA3P43357 314 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 MMP13P45452 471 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 PPP3CCP48454 512 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 TUFMP49411 452 aaKnown RBP8.58□□□□□ -1.04
C2CD3-215ENST00000540452 NDUFV1P49821 464 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 GDF10P55107 478 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 TPI1P60174 286 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 YWHAGP61981 247 aaKnown RBP eCLIP8.58□□□□□ -1.04
C2CD3-215ENST00000540452 RING1Q06587 406 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 DMTNQ08495 405 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 FAAP100Q0VG06 881 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 TRIP13Q15645 432 aaPredicted RBP8.58□□□□□ -1.04
C2CD3-215ENST00000540452 CA9Q16790 459 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 CTXN3Q4LDR2 81 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 SLC39A12Q504Y0 691 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 MANEALQ5VSG8 457 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 SNX30Q5VWJ9 437 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 SYPL2Q5VXT5 272 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 BTBD8Q5XKL5 378 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 TPGS2Q68CL5 300 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 SLC8B1Q6J4K2 584 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 GPRIN1Q7Z2K8 1008 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 CCDC25Q86WR0 208 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 KLHDC8BQ8IXV7 354 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 FAM71DQ8N9W8 422 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 PDZD8Q8NEN9 1154 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 HTR3CQ8WXA8 447 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 ACSF2Q96CM8 615 aaPredicted RBP8.58□□□□□ -1.04
C2CD3-215ENST00000540452 ZNF333Q96JL9 665 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 TSGA13Q96PP4 275 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 TTPALQ9BTX7 342 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 CCDC134Q9H6E4 229 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 CATSPERBQ9H7T0 1116 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 TMLHEQ9NVH6 421 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 EURLQ9NYK6 297 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.58□□□□□ -1.04
C2CD3-215ENST00000540452 IGSF9Q9P2J2 1179 aa8.58□□□□□ -1.04
C2CD3-215ENST00000540452 TET1Q8NFU7 2136 aa8.57□□□□□ -1.04
C2CD3-215ENST00000540452 DOCK4Q8N1I0 1966 aa8.57□□□□□ -1.04
C2CD3-215ENST00000540452 TNRC18O15417 2968 aaPredicted RBP8.57□□□□□ -1.04
C2CD3-215ENST00000540452 A0A0A0MRY4 1105 aa8.57□□□□□ -1.04
C2CD3-215ENST00000540452 KCNN4O15554 427 aa8.57□□□□□ -1.04
C2CD3-215ENST00000540452 GOT1P17174 413 aa8.57□□□□□ -1.04
C2CD3-215ENST00000540452 RBL1P28749 1068 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms