RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 ATG14Q6ZNE5 492 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 HFE2Q6ZVN8 426 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 STKLD1Q8NE28 680 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 DDX50Q9BQ39 737 aaKnown RBP14.09□□□□□ -0.15
BNIP3-202ENST00000540159 C16orf70Q9BSU1 422 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 MTMR10Q9NXD2 777 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 CNTN3Q9P232 1028 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 DNAJC16Q9Y2G8 782 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 ARHGAP42A6NI28 874 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 ATP9BO43861 1147 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 KRT38O76015 456 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 SLC25A27O95847 323 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 TPH1P17752 444 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 GCKP35557 465 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 GJA5P36382 358 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 INCA1Q0VD86 236 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 FASTKD1Q53R41 847 aaKnown RBP14.09□□□□□ -0.15
BNIP3-202ENST00000540159 MARCH8Q5T0T0 291 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 SYPL2Q5VXT5 272 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 NCBP2-AS2Q69YL0 99 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 TAPT1Q6NXT6 567 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 KDELC2Q7Z4H8 507 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 DPP9Q86TI2 863 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 GSDMBQ8TAX9 411 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 TMEM40Q8WWA1 233 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 EBNA1BP2Q99848 306 aaKnown RBP14.09□□□□□ -0.15
BNIP3-202ENST00000540159 CPSF2Q9P2I0 782 aaKnown RBP14.09□□□□□ -0.15
BNIP3-202ENST00000540159 PTPRFP10586 1907 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 AMHP03971 560 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 HOXA11P31270 313 aaPredicted RBP14.09□□□□□ -0.15
BNIP3-202ENST00000540159 ATICP31939 592 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 GNL1P36915 607 aaPredicted RBP14.09□□□□□ -0.15
BNIP3-202ENST00000540159 PDK2Q15119 407 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 PAN2Q504Q3 1202 aaKnown RBP14.09□□□□□ -0.15
BNIP3-202ENST00000540159 CRLF3Q8IUI8 442 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 ANKRD13AQ8IZ07 590 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 SMC1BQ8NDV3 1235 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 DNAJC9Q8WXX5 260 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 ZFP42Q96MM3 310 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 ARHGEF4Q9NR80 690 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 PNPOQ9NVS9 261 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 SYBUQ9NX95 663 aa14.09□□□□□ -0.15
BNIP3-202ENST00000540159 MTO1Q9Y2Z2 717 aaKnown RBP14.09□□□□□ -0.15
BNIP3-202ENST00000540159 EME2A4GXA9 379 aaPredicted RBP14.08□□□□□ -0.16
BNIP3-202ENST00000540159 MEIS3P2A8K0S8 358 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 RNF103O00237 685 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 DYNC1LI2O43237 492 aaPredicted RBP14.08□□□□□ -0.16
BNIP3-202ENST00000540159 PDE5AO76074 875 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 CD1EP15812 388 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 ATXN3P54252 364 aaPredicted RBP14.08□□□□□ -0.16
BNIP3-202ENST00000540159 SOX4Q06945 474 aaPredicted RBP14.08□□□□□ -0.16
BNIP3-202ENST00000540159 STX3Q13277 289 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 SLC9A4Q6AI14 798 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 ANO7Q6IWH7 933 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 PID1Q7Z2X4 250 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 DNAJB3Q8WWF6 145 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 HTR3CQ8WXA8 447 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 SPDYE5A6NIY4 337 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 FAM72CH0Y354 149 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 ALDOAP04075 364 aaKnown RBP14.08□□□□□ -0.16
BNIP3-202ENST00000540159 C6orf222P0C671 652 aaPredicted RBP14.08□□□□□ -0.16
BNIP3-202ENST00000540159 NCF2P19878 526 aaPredicted RBP14.08□□□□□ -0.16
BNIP3-202ENST00000540159 CRYMQ14894 314 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 FAM72AQ5TYM5 149 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 CAPRIN2Q6IMN6 1127 aaKnown RBP14.08□□□□□ -0.16
BNIP3-202ENST00000540159 FAM72DQ6L9T8 149 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 PIGZQ86VD9 579 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 FAM72BQ86X60 149 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 PNPLA1Q8N8W4 532 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 SCG3Q8WXD2 468 aaKnown RBP14.08□□□□□ -0.16
BNIP3-202ENST00000540159 PPCSQ9HAB8 311 aa14.08□□□□□ -0.16
BNIP3-202ENST00000540159 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.08□□□□□ -0.16
BNIP3-202ENST00000540159 M0QYT0 321 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
BNIP3-202ENST00000540159 TGM2P21980 687 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 ARL4AP40617 200 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 AFF1P51825 1210 aaKnown RBP14.07□□□□□ -0.16
BNIP3-202ENST00000540159 USP4Q13107 963 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 RALGPS1Q5JS13 557 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 ZNF484Q5JVG2 852 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 LGSNQ5TDP6 509 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 C10orf107Q8IVU9 208 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 OR52K1Q8NGK4 314 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 USP33Q8TEY7 942 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 TFB1MQ8WVM0 346 aaKnown RBP14.07□□□□□ -0.16
BNIP3-202ENST00000540159 P2RY11Q96G91 374 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 AGAP2Q99490 1192 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 RHOBTB2Q9BYZ6 727 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 FRMD8P1Q9BZ68 369 aaPredicted RBP14.07□□□□□ -0.16
BNIP3-202ENST00000540159 SNX25Q9H3E2 840 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 PRDM12Q9H4Q4 367 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 SSU72Q9NP77 194 aaKnown RBP14.07□□□□□ -0.16
BNIP3-202ENST00000540159 DPPA5A6NC42 116 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 NDC80O14777 642 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 NVLO15381 856 aaKnown RBP14.07□□□□□ -0.16
BNIP3-202ENST00000540159 RARBP10826 455 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 SMPD1P17405 629 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 ACAP1Q15027 740 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 FAM219BQ5XKK7 198 aa14.07□□□□□ -0.16
BNIP3-202ENST00000540159 CDKL3Q8IVW4 592 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms