RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SLC35B2Q8TB61 432 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 BCL7CQ8WUZ0 217 aaPredicted RBP17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 EDEM1Q92611 657 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 RSRC1Q96IZ7 334 aaKnown RBP17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 PGLYRP2Q96PD5 576 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 DHX35Q9H5Z1 703 aaKnown RBP17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 TMPRSS4Q9NRS4 437 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 TMEM120BA0PK00 339 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 TCP11X1B4DZS4 312 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 ACSL3O95573 720 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 LTFP02788 710 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 NCAM1P13591 858 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 FGFR3P22607 806 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 L1CAMP32004 1257 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 VCPP55072 806 aaKnown RBP17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 IFRD2Q12894 506 aaPredicted RBP17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 MRPL58Q14197 206 aaKnown RBP17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 NAIF1Q69YI7 327 aaPredicted RBP17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 PM20D1Q6GTS8 502 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 NPNTQ6UXI9 565 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 BNIPLQ7Z465 357 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 ANKLE1Q8NAG6 615 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 ARHGEF2Q92974 986 aaKnown RBP17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 RNF157Q96PX1 679 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 TMEM121Q9BTD3 319 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 AAASQ9NRG9 546 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 FGFR1OP2Q9NVK5 253 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 MTMR10Q9NXD2 777 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 STAP1Q9ULZ2 295 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 AP4E1Q9UPM8 1137 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 TP73O15350 636 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 ETS1P14921 441 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 SYDE1Q6ZW31 735 aaPredicted RBP17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 ZNF365Q70YC5 407 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 SCN4BQ8IWT1 228 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 DCP1BQ8IZD4 617 aaKnown RBP17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 PYROXD2Q8N2H3 581 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 LRRC43Q8N309 656 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 STKLD1Q8NE28 680 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 SLC7A14Q8TBB6 771 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 NKD2Q969F2 451 aaPredicted RBP17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 SERPINB12Q96P63 405 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 PRDM5Q9NQX1 630 aaPredicted RBP17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 PIGVQ9NUD9 493 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 WHRNQ9P202 907 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 GGT7Q9UJ14 662 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 DRG1Q9Y295 367 aaKnown RBP17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 USP3Q9Y6I4 520 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 SF3B1O75533 1304 aaKnown RBP eCLIP17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 TRIM43BA6NCK2 446 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 ZSCAN5DPP0CG00 497 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 ADCY8P40145 1251 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 NCALDP61601 193 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 RTP2Q5QGT7 225 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 VSTM1Q6UX27 236 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 RSPO2Q6UXX9 243 aaPredicted RBP17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 PQLC3Q8N755 202 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 PCDH19Q8TAB3 1148 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 TRIM43Q96BQ3 446 aaPredicted RBP17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 TMEM175Q9BSA9 504 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 PNPLA8Q9NP80 782 aa17.68■□□□□ 0.42
PCDHB17P-201ENST00000539533 APOC4-APOC2K7ER74 178 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 SKAP2O75563 359 aaPredicted RBP17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 DGKIO75912 1065 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 SUN1O94901 812 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 APOC2P02655 101 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 CSF2RAP15509 400 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 NQO1P15559 274 aaKnown RBP17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 CREB1P16220 341 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 KLRC2P26717 231 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 SLC5A3P53794 718 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 ARPP19P56211 112 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 DEUP1Q05D60 604 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 DPYSL2Q16555 572 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 GALNTL6Q49A17 601 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 SDHAF4Q5VUM1 108 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 BSPRYQ5W0U4 402 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 ALLCQ8N6M5 410 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 TTC13Q8NBP0 860 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 ATAD1Q8NBU5 361 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 KCTD15Q96SI1 283 aaPredicted RBP17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 ECT2Q9H8V3 914 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 TNFRSF10BO14763 440 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 ITGAVP06756 1048 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 GPR15P49685 360 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 KCNJ2P63252 427 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 LMNB2Q03252 620 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 PKN2Q16513 984 aaKnown RBP17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 DDR2Q16832 855 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 ZNF280DQ6N043 979 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 FAM117BQ6P1L5 589 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 C1orf228Q6PIY5 440 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 STAMBPL1Q96FJ0 436 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 FZD10Q9ULW2 581 aa17.67■□□□□ 0.42
PCDHB17P-201ENST00000539533 ATP5DP30049 168 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 CHKAP35790 457 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 PGFP49763 221 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 TFDP2Q14188 446 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 NFE2Q16621 373 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms