RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 HSD3B7Q9H2F3 369 aa12.81□□□□□ -0.36
CLTCL1-205ENST00000538828 ACP6Q9NPH0 428 aa12.81□□□□□ -0.36
CLTCL1-205ENST00000538828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLTCL1-205ENST00000538828 GMEB2Q9UKD1 530 aa12.81□□□□□ -0.36
CLTCL1-205ENST00000538828 MYO6Q9UM54 1294 aa12.81□□□□□ -0.36
CLTCL1-205ENST00000538828 PLXND1Q9Y4D7 1925 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 CEP250Q9BV73 2442 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 EML5Q05BV3 1969 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 RPP40O75818 363 aaKnown RBP12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 CALCAP01258 141 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 HMBSP08397 361 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 HOXD9P28356 352 aaPredicted RBP12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 GBP1P32455 592 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 CDK17Q00537 523 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 USP39Q53GS9 565 aaKnown RBP12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 SPDYCQ5MJ68 293 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 C10orf76Q5T2E6 689 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 PIK3R6Q5UE93 754 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 SDE2Q6IQ49 451 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 OLFML1Q6UWY5 402 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 TRIM72Q6ZMU5 477 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 CACNA2D4Q7Z3S7 1137 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 ANKS1BQ7Z6G8 1248 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 KIAA0907Q7Z7F0 614 aaPredicted RBP12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 TXNDC5Q8NBS9 432 aaKnown RBP12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 OLIG1Q8TAK6 271 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 EPS8L1Q8TE68 723 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 PGAP3Q96FM1 320 aaPredicted RBP12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 BTN2A3PQ96KV6 586 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 FCRL2Q96LA5 508 aaPredicted RBP12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 FUCA2Q9BTY2 467 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 SLC12A6Q9UHW9 1150 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 NAALADL1Q9UQQ1 740 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 PCDHGA5Q9Y5G8 931 aa12.8□□□□□ -0.36
CLTCL1-205ENST00000538828 SDK1Q7Z5N4 2213 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 TYW5A2RUC4 315 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 PRRT4C9JH25 899 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 SGK1O00141 431 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 ADAM23O75077 832 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 KLF8O95600 359 aaPredicted RBP12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 TRUB2O95900 331 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 APOEP02649 317 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 CCDC172P0C7W6 258 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 NOS2P35228 1153 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 TIE1P35590 1138 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 SOX5P35711 763 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 STAT1P42224 750 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 SLC6A3Q01959 620 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 UBXN1Q04323 297 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 KDSRQ06136 332 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 DMWDQ09019 674 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 SKOR2Q2VWA4 1001 aaPredicted RBP12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 PTPN20Q4JDL3 420 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 ANO6Q4KMQ2 910 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 FAM133BQ5BKY9 247 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 SYPL2Q5VXT5 272 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 CAVIN1Q6NZI2 390 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 METTL3Q86U44 580 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 ALLCQ8N6M5 410 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 NEK11Q8NG66 645 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 DDI1Q8WTU0 396 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 NT5C3BQ969T7 300 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 C18orf8Q96DM3 657 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 SPAG5Q96R06 1193 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 CD248Q9HCU0 757 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 THAP10Q9P2Z0 257 aaPredicted RBP12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 NCDNQ9UBB6 729 aa12.79□□□□□ -0.36
CLTCL1-205ENST00000538828 PIK3R2O00459 728 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 ZBTB24O43167 697 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 MSI1O43347 362 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 DAB1O75553 588 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 F9P00740 461 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 CYP1A1P04798 512 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 SDHBP21912 280 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 CCR1P32246 355 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 MATKP42679 507 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 ZNF165P49910 485 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 SEC13P55735 322 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 GSCP56915 257 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 POLR2FP61218 127 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 CDR2Q01850 454 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 SYCP1Q15431 976 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 DCAF6Q58WW2 860 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 EMC10Q5UCC4 262 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 TTC39BQ5VTQ0 682 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 HEATR6Q6AI08 1181 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 TMEM92Q6UXU6 159 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 CEP68Q76N32 757 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 TAC4Q86UU9 113 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 ERICH1Q86X53 443 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 AOPEPQ8N6M6 819 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 ATP6V0D2Q8N8Y2 350 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 KDM1BQ8NB78 822 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 HJURPQ8NCD3 748 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 FIBINQ8TAL6 211 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 P2RY11Q96G91 374 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 HHIPQ96QV1 700 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 PDCL3Q9H2J4 239 aa12.78□□□□□ -0.36
CLTCL1-205ENST00000538828 SYNCQ9H7C4 482 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms