RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 GATMP50440 423 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 TPI1P60174 286 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 YWHAGP61981 247 aaKnown RBP eCLIP21.09■□□□□ 0.97
DDX55-205ENST00000538744 PDZD4Q76G19 769 aaPredicted RBP21.09■□□□□ 0.97
DDX55-205ENST00000538744 NPAS4Q8IUM7 802 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 SCN4BQ8IWT1 228 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 LRRN4Q8WUT4 740 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 ARHGEF2Q92974 986 aaKnown RBP21.09■□□□□ 0.97
DDX55-205ENST00000538744 FERMT1Q9BQL6 677 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 MRPL9Q9BYD2 267 aaKnown RBP21.09■□□□□ 0.97
DDX55-205ENST00000538744 CTNNAL1Q9UBT7 734 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 FAM72CH0Y354 149 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 DCLK1O15075 740 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 ALDH2P05091 517 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 IFRD2Q12894 506 aaPredicted RBP21.08■□□□□ 0.97
DDX55-205ENST00000538744 CBLBQ13191 982 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 PDK1Q15118 436 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 CTXN3Q4LDR2 81 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 CCDC38Q502W7 563 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 FAM72AQ5TYM5 149 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 FAM171A1Q5VUB5 890 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 BTBD8Q5XKL5 378 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 FAM72DQ6L9T8 149 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 ZNF280DQ6N043 979 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 VSTM1Q6UX27 236 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 ARHGEF18Q6ZSZ5 1173 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 EXOC3L1Q86VI1 746 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 FAM72BQ86X60 149 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 TDRPQ86YL5 185 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 VPS52Q8N1B4 723 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 CCDC33Q8N5R6 958 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 FBXO36Q8NEA4 188 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 HTR3CQ8WXA8 447 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 EPN3Q9H201 632 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 PCDHB5Q9Y5E4 795 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 RAD54BQ9Y620 910 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 PLXNA3P51805 1871 aa21.08■□□□□ 0.97
DDX55-205ENST00000538744 TET1Q8NFU7 2136 aa21.08■□□□□ 0.96
DDX55-205ENST00000538744 CLUHO75153 1309 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 I6L893 689 aaPredicted RBP21.07■□□□□ 0.96
DDX55-205ENST00000538744 PPP1R12AO14974 1030 aaPredicted RBP21.07■□□□□ 0.96
DDX55-205ENST00000538744 TRIM66O15016 1216 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 ZNF189O75820 626 aaPredicted RBP21.07■□□□□ 0.96
DDX55-205ENST00000538744 STK10O94804 968 aaKnown RBP21.07■□□□□ 0.96
DDX55-205ENST00000538744 PARNO95453 639 aaKnown RBP21.07■□□□□ 0.96
DDX55-205ENST00000538744 IGLV3-25P01717 112 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 GPX6P59796 221 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 PRKD1Q15139 912 aaPredicted RBP21.07■□□□□ 0.96
DDX55-205ENST00000538744 TCTN1Q2MV58 587 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 CAPN12Q6ZSI9 719 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 BCAS4Q8TDM0 211 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 CENPTQ96BT3 561 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 C8orf48Q96LL4 319 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 EPAS1Q99814 870 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 TKTL2Q9H0I9 626 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 HIPK3Q9H422 1215 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 ETNK1Q9HBU6 452 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 EURLQ9NYK6 297 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 FNDC1Q4ZHG4 1894 aaPredicted RBP21.07■□□□□ 0.96
DDX55-205ENST00000538744 OR6C75A6NL08 312 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 VAV1P15498 845 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 ATP2A2P16615 1042 aaKnown RBP21.07■□□□□ 0.96
DDX55-205ENST00000538744 ERCC2P18074 760 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 SLC11A1P49279 550 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 GLUD2P49448 558 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 MRPL58Q14197 206 aaKnown RBP21.07■□□□□ 0.96
DDX55-205ENST00000538744 FAXCQ5TGI0 409 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 ANKRD33Q7Z3H0 272 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 CEP57Q86XR8 500 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 PALM2Q8IXS6 379 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 RNF34Q969K3 372 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 SCLYQ96I15 445 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 BEGAINQ9BUH8 593 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 MARCH5Q9NX47 278 aa21.07■□□□□ 0.96
DDX55-205ENST00000538744 A0A0A0MRY4 1105 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 CXCL10P02778 98 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 AMHP03971 560 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 CHN1P15882 459 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 FGFR3P22607 806 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 CYP2C18P33260 490 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 MAGEA11P43364 429 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 ELAVL2Q12926 359 aaKnown RBP21.06■□□□□ 0.96
DDX55-205ENST00000538744 CRIPAKQ8N1N5 446 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 MCUQ8NE86 351 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 MDM1Q8TC05 714 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 SPATA13Q96N96 652 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 LGMNQ99538 433 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 WDR83Q9BRX9 315 aaKnown RBP21.06■□□□□ 0.96
DDX55-205ENST00000538744 TMEM175Q9BSA9 504 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 SMOC2Q9H3U7 446 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 TBK1Q9UHD2 729 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 SLC24A2Q9UI40 661 aa21.06■□□□□ 0.96
DDX55-205ENST00000538744 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.05■□□□□ 0.96
DDX55-205ENST00000538744 POC1B-GALNT4F8VUJ3 575 aa21.05■□□□□ 0.96
DDX55-205ENST00000538744 IRAK2O43187 625 aa21.05■□□□□ 0.96
DDX55-205ENST00000538744 METTL18O95568 372 aa21.05■□□□□ 0.96
DDX55-205ENST00000538744 APRTP07741 180 aa21.05■□□□□ 0.96
DDX55-205ENST00000538744 TPSB2P20231 275 aa21.05■□□□□ 0.96
DDX55-205ENST00000538744 ATN1P54259 1190 aaPredicted RBP21.05■□□□□ 0.96
DDX55-205ENST00000538744 PPARDQ03181 441 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms