RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 HAPLN2Q9GZV7 340 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 XPNPEP1Q9NQW7 623 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 PDLIM7Q9NR12 457 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 PAIP2BQ9ULR5 123 aaKnown RBP19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 KCNN4O15554 427 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 LDHAP00338 332 aaKnown RBP19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 CAPNS1P04632 268 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 ZNF23P17027 643 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 CDK9P50750 372 aaKnown RBP19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 FAM47CQ5HY64 1035 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 FAXCQ5TGI0 409 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 EMC1Q8N766 993 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 SMYD1Q8NB12 490 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 BIRC8Q96P09 236 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 EBNA1BP2Q99848 306 aaKnown RBP19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 INO80BQ9C086 356 aaPredicted RBP19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 CISHQ9NSE2 258 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 FBXO28Q9NVF7 368 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 USP18Q9UMW8 372 aa19.14■□□□□ 0.65
SFSWAP-207ENST00000538548 H0YIN7 160 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 ZBTB14O43829 449 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 TRUB2O95900 331 aaKnown RBP19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 ICAM1P05362 532 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 MAGEA3P43357 314 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 HARS2P49590 506 aaKnown RBP19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 PSMC1P62191 440 aaKnown RBP19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 CDKL1Q00532 357 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 TMEM62Q0P6H9 643 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 ZBTB41Q5SVQ8 909 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 DHRS4L2Q6PKH6 230 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 RDM1Q8NG50 284 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 KBTBD7Q8WVZ9 684 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 PHF12Q96QT6 1004 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 FEM1BQ9UK73 627 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 FAF1Q9UNN5 650 aaPredicted RBP19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 CNTNAP2Q9UHC6 1331 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 ENTPD3O75355 529 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 TRPA1O75762 1119 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 ARRB2P32121 409 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 ABCE1P61221 599 aaKnown RBP19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 MMRN1Q13201 1228 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 SLC44A4Q53GD3 710 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 SLFN12LQ6IEE8 588 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 C16orf89Q6UX73 402 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 C10orf107Q8IVU9 208 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 SIGLEC10Q96LC7 697 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 COPS7BQ9H9Q2 264 aaPredicted RBP19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 DCDC2Q9UHG0 476 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 ZNHIT2Q9UHR6 403 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 PCDHA10Q9Y5I2 948 aa19.13■□□□□ 0.65
SFSWAP-207ENST00000538548 SH3PXD2BA1X283 911 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 ENDOD1O94919 500 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 YWHAEP62258 255 aaKnown RBP19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 FAM182AQ5T1J6 154 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 METTL21CQ5VZV1 264 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 SCARA3Q6AZY7 606 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 Q6ZNX1 250 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 MCF2L2Q86YR7 1114 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 LILRA2Q8N149 483 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 POLR3FQ9H1D9 316 aaPredicted RBP19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 ARHGEF38Q9NXL2 777 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 TJP2Q9UDY2 1190 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 ALDOAP04075 364 aaKnown RBP19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 CCDC130P13994 396 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 PDE1CQ14123 709 aaPredicted RBP19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 ACAP1Q15027 740 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 POTEHQ6S545 545 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 FLAD1Q8NFF5 587 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 TSPAN14Q8NG11 270 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 CLEC4DQ8WXI8 215 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 DLG3Q92796 817 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 MSTO1Q9BUK6 570 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 VPS28Q9UK41 221 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 CNOT11Q9UKZ1 510 aaKnown RBP19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 PCDHA11Q9Y5I1 949 aa19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 COL11A2P13942 1736 aaPredicted RBP19.12■□□□□ 0.65
SFSWAP-207ENST00000538548 ATG7O95352 703 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 PSMC3P17980 439 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 EIF2AK2P19525 551 aaKnown RBP19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 YY1P25490 414 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 VARSP26640 1264 aaKnown RBP19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 ALDH1B1P30837 517 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 NUDT2P50583 147 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 CDH6P55285 790 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 GHRHRQ02643 423 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 DENND1BQ6P3S1 775 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 CYS1Q717R9 158 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 SLC4A11Q8NBS3 891 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 NLRP7Q8WX94 980 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 RSPH1Q8WYR4 309 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 ZBTB45Q96K62 511 aaPredicted RBP19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 LENG8Q96PV6 779 aaPredicted RBP19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 CCT7Q99832 543 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 NIF3L1Q9GZT8 377 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 MOCS1Q9NZB8 636 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 GABBR1Q9UBS5 961 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 PACSIN3Q9UKS6 424 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 SQORQ9Y6N5 450 aa19.11■□□□□ 0.65
SFSWAP-207ENST00000538548 KLHL41O60662 606 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms