RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PIAS3Q9Y6X2 628 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 DOCK5Q9H7D0 1870 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 PLK4O00444 970 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 KCNN4O15554 427 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 PAGE1O75459 146 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 PIAS1O75925 651 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 PRAMEF12O95522 483 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 RB1P06400 928 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 TPH1P17752 444 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 POLR2EP19388 210 aaKnown RBP7.49□□□□□ -1.21
MSH6-209ENST00000538136 DHPSP49366 369 aaPredicted RBP7.49□□□□□ -1.21
MSH6-209ENST00000538136 NRLP54845 237 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 SNRPFP62306 86 aaKnown RBP7.49□□□□□ -1.21
MSH6-209ENST00000538136 MRPS5P82675 430 aaKnown RBP7.49□□□□□ -1.21
MSH6-209ENST00000538136 SLC6A3Q01959 620 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 IFFO1Q0D2I5 559 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 SLC18A3Q16572 532 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 BMT2Q1RMZ1 405 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 BBS9Q3SYG4 887 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 KIAA0319Q5VV43 1072 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 NPNTQ6UXI9 565 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 DDX42Q86XP3 938 aaKnown RBP eCLIP7.49□□□□□ -1.21
MSH6-209ENST00000538136 NT5DC4Q86YG4 428 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 TTC39CQ8N584 583 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 ATPAF2Q8N5M1 289 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 GSDMBQ8TAX9 411 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 BLOC1S5Q8TDH9 187 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 IFT43Q96FT9 208 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 ZNF334Q9HCZ1 680 aaPredicted RBP7.49□□□□□ -1.21
MSH6-209ENST00000538136 USP18Q9UMW8 372 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 FAM170BA6NMN3 283 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 CCP110O43303 1012 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 SNAP91O60641 907 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 GOT1P17174 413 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 PBLDP30039 288 aaPredicted RBP7.49□□□□□ -1.21
MSH6-209ENST00000538136 FMO1Q01740 532 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 ZSCAN30Q86W11 494 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 SLC9A9Q8IVB4 645 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 SHC3Q92529 594 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 RBM41Q96IZ5 413 aaKnown RBP7.49□□□□□ -1.21
MSH6-209ENST00000538136 SLC46A2Q9BY10 475 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 OSBPL6Q9BZF3 934 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 FBXO10Q9UK96 956 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 DNAJC16Q9Y2G8 782 aa7.49□□□□□ -1.21
MSH6-209ENST00000538136 ZNFX1Q9P2E3 1918 aaKnown RBP7.49□□□□□ -1.21
MSH6-209ENST00000538136 COCHO43405 550 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 NARSO43776 548 aaKnown RBP7.48□□□□□ -1.21
MSH6-209ENST00000538136 RAMP2O60895 175 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 FSBPO95073 299 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 APRTP07741 180 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 CTPS1P17812 591 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 MARCKSL1P49006 195 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 CXCR3P49682 368 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 PGFP49763 221 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 RAD51Q06609 339 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 SEPT7Q16181 437 aaKnown RBP7.48□□□□□ -1.21
MSH6-209ENST00000538136 C1orf220Q5T0J3 134 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 VSTM1Q6UX27 236 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 UNC93AQ86WB7 457 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 SLC43A3Q8NBI5 491 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 OR14C36Q8NHC7 312 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 SPATA18Q8TC71 538 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 KBTBD7Q8WVZ9 684 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 EXT2Q93063 718 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 ERGIC2Q96RQ1 377 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 PRKD2Q9BZL6 878 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 RNF38Q9H0F5 515 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 ELAC1Q9H777 363 aaKnown RBP7.48□□□□□ -1.21
MSH6-209ENST00000538136 ABCC13Q9NSE7 274 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 RAB23Q9ULC3 237 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.48□□□□□ -1.21
MSH6-209ENST00000538136 ZFYVE26Q68DK2 2539 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 DNAJC13O75165 2243 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 GOLGA8KD6RF30 607 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 H0Y858 1186 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 GOLGA8TH3BQL2 631 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 HSF2BPO75031 334 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 HOXD8P13378 290 aaPredicted RBP7.48□□□□□ -1.21
MSH6-209ENST00000538136 CALCOCO2Q13137 446 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 KRT33BQ14525 404 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 STILQ15468 1287 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 TAS2R42Q7RTR8 314 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 CCDC63Q8NA47 563 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 FAM81BQ96LP2 452 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 NAPGQ99747 312 aaPredicted RBP7.48□□□□□ -1.21
MSH6-209ENST00000538136 NAA15Q9BXJ9 866 aaKnown RBP7.48□□□□□ -1.21
MSH6-209ENST00000538136 ACTL7AQ9Y615 435 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 A0A0U1RQS6 177 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 SLC26A4O43511 780 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 CXCL10P02778 98 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 TCF4P15884 667 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 OXCT1P55809 520 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 RWDD2BP57060 319 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 SLC5A9Q2M3M2 681 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 ZNF542PQ5EBM4 170 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 NT5DC3Q86UY8 548 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 MMAAQ8IVH4 418 aaKnown RBP7.48□□□□□ -1.21
MSH6-209ENST00000538136 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.48□□□□□ -1.21
MSH6-209ENST00000538136 MCOLN2Q8IZK6 566 aa7.48□□□□□ -1.21
MSH6-209ENST00000538136 ST6GALNAC4Q9H4F1 302 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms