RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 TBX4P57082 545 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 YWHAZP63104 245 aaKnown RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 NOMO3P69849 1222 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 MRPS21P82921 87 aaKnown RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 DMC1Q14565 340 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 NR1I3Q14994 352 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 ZSCAN23Q3MJ62 389 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 RAB6CQ53S08 254 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 ZC3H12AQ5D1E8 599 aaKnown RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 ADGRF1Q5T601 910 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 PIK3R6Q5UE93 754 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 BNIPLQ7Z465 357 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 IRF2BP2Q7Z5L9 587 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 KIAA0907Q7Z7F0 614 aaPredicted RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 LUZP1Q86V48 1076 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 WDR5BQ86VZ2 330 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 XYLT1Q86Y38 959 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 DEFB106AQ8N104 65 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 TXNDC5Q8NBS9 432 aaKnown RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 CPA5Q8WXQ8 436 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 NKD2Q969F2 451 aaPredicted RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 NT5C3BQ969T7 300 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 FAM149B1Q96BN6 582 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 PRICKLE1Q96MT3 831 aaPredicted RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 DCLK3Q9C098 648 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 RAB6CQ9H0N0 254 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 NUCKS1Q9H1E3 243 aaKnown RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 EPC1Q9H2F5 836 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 OLA1Q9NTK5 396 aaKnown RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 DNAJC17Q9NVM6 304 aaKnown RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 WDR35Q9P2L0 1181 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 LSM7Q9UK45 103 aaKnown RBP8.75□□□□□ -1.01
SPARC-208ENST00000538026 STRIP2Q9ULQ0 834 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 MMP17Q9ULZ9 603 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 ZNF510Q9Y2H8 683 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 SLC27A6Q9Y2P4 619 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 CEP192Q8TEP8 1941 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 PLXND1Q9Y4D7 1925 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 FRYQ5TBA9 3013 aa8.75□□□□□ -1.01
SPARC-208ENST00000538026 LAMA5O15230 3695 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 MUC22E2RYF6 1773 aaPredicted RBP8.74□□□□□ -1.01
SPARC-208ENST00000538026 TBC1D3BA6NDS4 549 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 DCLK1O15075 740 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 IRAK2O43187 625 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 ACSL4O60488 711 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 GJB6O95452 261 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 KLF8O95600 359 aaPredicted RBP8.74□□□□□ -1.01
SPARC-208ENST00000538026 TRUB2O95900 331 aaKnown RBP8.74□□□□□ -1.01
SPARC-208ENST00000538026 LMNAP02545 664 aaKnown RBP8.74□□□□□ -1.01
SPARC-208ENST00000538026 APODP05090 189 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 CDK11BP21127 795 aaKnown RBP8.74□□□□□ -1.01
SPARC-208ENST00000538026 HLA-FP30511 346 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 KRT9P35527 623 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 PBX1P40424 430 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 WASP42768 502 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 IRAK1P51617 712 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 ATXN1P54253 815 aaKnown RBP8.74□□□□□ -1.01
SPARC-208ENST00000538026 BPIFB4P59827 614 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 RPS24P62847 133 aaKnown RBP8.74□□□□□ -1.01
SPARC-208ENST00000538026 CDR2Q01850 454 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 SLC6A3Q01959 620 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 RING1Q06587 406 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 GOLGA8FQ08AF8 430 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 GOLGA8DPQ0D2H9 430 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 NNTQ13423 1086 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 CRY1Q16526 586 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 DCAF6Q58WW2 860 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 FSCBQ5H9T9 825 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 NAA35Q5VZE5 725 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 GRAMD4Q6IC98 578 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 OR6B2Q6IFH4 312 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 KIAA1211LQ6NV74 962 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 SLC26A9Q7LBE3 791 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 PHLDB2Q86SQ0 1253 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 C14orf80Q86SX3 495 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 LONP2Q86WA8 852 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 RASSF3Q86WH2 238 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 FRMD1Q8N878 549 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 ZNF397Q8NF99 534 aaPredicted RBP8.74□□□□□ -1.01
SPARC-208ENST00000538026 SLC30A5Q8TAD4 765 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 SORCS1Q8WY21 1168 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 AZIN2Q96A70 460 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 PRMT1Q99873 361 aaKnown RBP8.74□□□□□ -1.01
SPARC-208ENST00000538026 FAM126AQ9BYI3 521 aaPredicted RBP8.74□□□□□ -1.01
SPARC-208ENST00000538026 TTYH3Q9C0H2 523 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 POPDC2Q9HBU9 364 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 ASNSD1Q9NWL6 643 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 TMEM59LQ9UK28 342 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 TLR6Q9Y2C9 796 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 SNX10Q9Y5X0 201 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 CACNA1EQ15878 2313 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 NCOR2Q9Y618 2525 aa8.74□□□□□ -1.01
SPARC-208ENST00000538026 TNRC6BQ9UPQ9 1833 aaKnown RBP8.73□□□□□ -1.01
SPARC-208ENST00000538026 DOCK9Q9BZ29 2069 aa8.73□□□□□ -1.01
SPARC-208ENST00000538026 CCDC163A0A0D9SF12 145 aa8.73□□□□□ -1.01
SPARC-208ENST00000538026 TCRBV5S1A1TA0A578 114 aa8.73□□□□□ -1.01
SPARC-208ENST00000538026 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.73□□□□□ -1.01
SPARC-208ENST00000538026 ATG13O75143 517 aa8.73□□□□□ -1.01
SPARC-208ENST00000538026 LATS1O95835 1130 aa8.73□□□□□ -1.01
SPARC-208ENST00000538026 GLI1P08151 1106 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms