RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 PLD5Q8N7P1 536 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 C12orf50Q8NA57 414 aaPredicted RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 C1orf54Q8WWF1 131 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 RNF34Q969K3 372 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 MAGOHBQ96A72 148 aaKnown RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 C1orf74Q96LT6 269 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 CSPG4P5Q96PW8 444 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 CDK5RAP1Q96SZ6 601 aaKnown RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 KRT12Q99456 494 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 ZNF670Q9BS34 389 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 LRRC1Q9BTT6 524 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 KLF16Q9BXK1 252 aaPredicted RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 CALN1Q9BXU9 219 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 DCLK3Q9C098 648 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 DDX47Q9H0S4 455 aaKnown RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 EPC1Q9H2F5 836 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 RCOR3Q9P2K3 495 aaPredicted RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 DNMT3BQ9UBC3 853 aaKnown RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 HBS1LQ9Y450 684 aaKnown RBP12.15□□□□□ -0.46
SPARC-207ENST00000537849 HCFC2Q9Y5Z7 792 aa12.15□□□□□ -0.46
SPARC-207ENST00000537849 TRANK1O15050 2925 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 C2orf78A6NCI8 922 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 BHMG1C9JSJ3 638 aaPredicted RBP12.14□□□□□ -0.47
SPARC-207ENST00000537849 PHF2O75151 1096 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 MOSPD3O75425 235 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 PAGE1O75459 146 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 POU2F2P09086 479 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 SLC2A3P11169 496 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 GOT1P17174 413 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 PTPN2P17706 415 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 GABRR2P28476 465 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 CCR2P41597 374 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 KPNA1P52294 538 aaPredicted RBP12.14□□□□□ -0.47
SPARC-207ENST00000537849 RBM10P98175 930 aaKnown RBP12.14□□□□□ -0.47
SPARC-207ENST00000537849 NRG1Q02297 640 aaPredicted RBP12.14□□□□□ -0.47
SPARC-207ENST00000537849 TFDP2Q14188 446 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 TEX35Q5T0J7 233 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 SLC9A4Q6AI14 798 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 TTC27Q6P3X3 843 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 CHRDL2Q6WN34 429 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 C14orf80Q86SX3 495 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 TADA2BQ86TJ2 420 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 MIB1Q86YT6 1006 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 ELMOD1Q8N336 334 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 UBXN4Q92575 508 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 ZNF707Q96C28 371 aaPredicted RBP12.14□□□□□ -0.47
SPARC-207ENST00000537849 MRPL38Q96DV4 380 aaKnown RBP12.14□□□□□ -0.47
SPARC-207ENST00000537849 SLC22A12Q96S37 553 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 CYP2S1Q96SQ9 504 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 CORO1BQ9BR76 489 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 MAK16Q9BXY0 300 aaKnown RBP12.14□□□□□ -0.47
SPARC-207ENST00000537849 PRKD2Q9BZL6 878 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 PRDM16Q9HAZ2 1276 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 GKN1Q9NS71 199 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 HOMER3Q9NSC5 361 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 ETNK2Q9NVF9 386 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 HCFC1R1Q9NWW0 138 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 OR12D3Q9UGF7 316 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 XPO7Q9UIA9 1087 aaKnown RBP12.14□□□□□ -0.47
SPARC-207ENST00000537849 RASAL2Q9UJF2 1139 aa12.14□□□□□ -0.47
SPARC-207ENST00000537849 DRG1Q9Y295 367 aaKnown RBP12.14□□□□□ -0.47
SPARC-207ENST00000537849 CCDC195A0A1B0GUA6 201 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 H3BRJ5 948 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 EEF2KO00418 725 aaKnown RBP12.13□□□□□ -0.47
SPARC-207ENST00000537849 RAD51CO43502 376 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 OLFM2O95897 454 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 HMBSP08397 361 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 CHRNA3P32297 505 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 ARL4AP40617 200 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 KCNJ1P48048 391 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 NRIP1P48552 1158 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 KCNQ1P51787 676 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 ZNF135P52742 658 aaPredicted RBP12.13□□□□□ -0.47
SPARC-207ENST00000537849 MRPS25P82663 173 aaKnown RBP12.13□□□□□ -0.47
SPARC-207ENST00000537849 COG7P83436 770 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 SLC10A2Q12908 348 aaPredicted RBP12.13□□□□□ -0.47
SPARC-207ENST00000537849 SNX1Q13596 522 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 DPYSQ14117 519 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 GLE1Q53GS7 698 aaKnown RBP12.13□□□□□ -0.47
SPARC-207ENST00000537849 PIK3R6Q5UE93 754 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 MANEALQ5VSG8 457 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 TXNDC8Q6A555 127 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 DRICH1Q6PGQ1 229 aaPredicted RBP12.13□□□□□ -0.47
SPARC-207ENST00000537849 ZNF683Q8IZ20 524 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 ATP6V0D2Q8N8Y2 350 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 VN1R2Q8NFZ6 395 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 SLC35B2Q8TB61 432 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 ATG4AQ8WYN0 398 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 WBP2Q969T9 261 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 AZIN2Q96A70 460 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 SIK2Q9H0K1 926 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 SLITRK6Q9H5Y7 841 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 ANKZF1Q9H8Y5 726 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 ARHGEF4Q9NR80 690 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 ZDHHC7Q9NXF8 308 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 SAE1Q9UBE0 346 aaPredicted RBP12.13□□□□□ -0.47
SPARC-207ENST00000537849 PCYOX1Q9UHG3 505 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 AMACRQ9UHK6 382 aa12.13□□□□□ -0.47
SPARC-207ENST00000537849 DMGDHQ9UI17 866 aaKnown RBP12.13□□□□□ -0.47
SPARC-207ENST00000537849 HS3ST4Q9Y661 456 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms