RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 TCHHL1Q5QJ38 904 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 CYP4V2Q6ZWL3 525 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 TOR1AIP2Q8NFQ8 470 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 TBC1D15Q8TC07 691 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 TBCKQ8TEA7 893 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 PSD2Q9BQI7 771 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 MTMR4Q9NYA4 1195 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 TBC1D14Q9P2M4 693 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 EBF1Q9UH73 591 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 TCRBV5S4A2TA0A5A2 114 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 PRR5-ARHGAP8B1AHC4 643 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 hCG_1984214I3L0E3 225 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 TAF4O00268 1085 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 IL1BP01584 269 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 ADSLP30566 484 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 ARHGAP8P85298 464 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 CENPCQ03188 943 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 NOL9Q5SY16 702 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 AKAP14Q86UN6 197 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 RASSF5Q8WWW0 418 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 ATG4CQ96DT6 458 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 GLT1D1Q96MS3 346 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 C17orf80Q9BSJ5 609 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 MKS1Q9NXB0 559 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 ZMAT5Q9UDW3 170 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 TMX2Q9Y320 296 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 SPAG6O75602 509 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 BCL10O95999 233 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 CHRNB2P17787 502 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 EIF2AK2P19525 551 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 AQP5P55064 265 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 ZNF846Q147U1 533 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 DLK2Q6UY11 383 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 FBXW8Q8N3Y1 598 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 PWWP2AQ96N64 755 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 P2RX7Q99572 595 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 OSBPL11Q9BXB4 747 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 FRMD8Q9BZ67 464 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 SCN7AQ01118 1682 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 IGSF9BQ9UPX0 1349 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 CHD4Q14839 1912 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 ZSCAN5BA6NJL1 495 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 ASNA1O43681 348 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 ARHGAP44Q17R89 818 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 TRIM71Q2Q1W2 868 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 CCDC14Q49A88 953 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 LDLRAD1Q5T700 205 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 DEFB107AQ8IZN7 70 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 ATL1Q8WXF7 558 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 RANBP9Q96S59 729 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 DCLK3Q9C098 648 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 PCDH12Q9NPG4 1184 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 ITGA11Q9UKX5 1188 aa11.19□□□□□ -0.62
CLSTN3-207ENST00000537408 TCRBV7S2A1N4TA0A589 114 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 GNG2P59768 71 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 OTUD4Q01804 1114 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 SPCS2Q15005 226 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 UBE2SQ16763 222 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 TJAP1Q5JTD0 557 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 EEPD1Q7L9B9 569 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 ZFPM1Q8IX07 1006 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 ACER1Q8TDN7 264 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 ARMC1Q9NVT9 282 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 STMN3Q9NZ72 180 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 ANKMY1Q9P2S6 941 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 DNM3Q9UQ16 869 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 SPEF1Q9Y4P9 236 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 SNCAIPQ9Y6H5 919 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 PROCP04070 461 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 CDK18Q07002 472 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 TRAF2Q12933 501 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 TTLL4Q14679 1199 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 MYO1HQ8N1T3 1032 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 PPM1KQ8N3J5 372 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 SLC30A5Q8TAD4 765 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 TMEM79Q9BSE2 394 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 C2orf49Q9BVC5 232 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 TDRD1Q9BXT4 1180 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 SMARCAD1Q9H4L7 1026 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 FAM96AQ9H5X1 160 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 CCDC177Q9NQR7 707 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 GIMAP4Q9NUV9 329 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 SEPT10Q9P0V9 454 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 POU2F3Q9UKI9 436 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 PCDHGA3Q9Y5H0 932 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 LOC105371267A0A1B0GV96 52 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 ARHGEF35A5YM69 484 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 SNTNA6NMZ2 147 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 FOXD2O60548 495 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 SNAP91O60641 907 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 DEAF1O75398 565 aaPredicted RBP11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 KITP10721 976 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 FLT3LGP49771 235 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 JAM2P57087 298 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 EFTUD2Q15029 972 aaKnown RBP eCLIP11.18□□□□□ -0.625e-7■■■■■ 36.5
CLSTN3-207ENST00000537408 PPM1LQ5SGD2 360 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 CST9Q5W186 159 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 ZNF354CQ86Y25 554 aa11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 NSUN6Q8TEA1 469 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-207ENST00000537408 ZNF296Q8WUU4 475 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms