RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CD93Q9NPY3 652 aa14.89□□□□□ -0.03
RTN3P1-201ENST00000536295 TMEM74BQ9NUR3 256 aa14.89□□□□□ -0.03
RTN3P1-201ENST00000536295 ELOVL2Q9NXB9 296 aa14.89□□□□□ -0.03
RTN3P1-201ENST00000536295 THAP10Q9P2Z0 257 aaPredicted RBP14.89□□□□□ -0.03
RTN3P1-201ENST00000536295 IGHV1OR15-9A0A0B4J2B8 117 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 GOLGA6L7A0A1B0GV03 622 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 C4orf47A7E2U8 309 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 AP5Z1O43299 807 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 ZNF217O75362 1048 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 ITPKAP23677 461 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 GNA15P30679 374 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 SGSHP51688 502 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 TBX4P57082 545 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 IRX4P78413 519 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 ARID5AQ03989 594 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 ZNF234Q14588 700 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 FUT11Q495W5 492 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 TRIM61Q5EBN2 209 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 TMEM215Q68D42 235 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 RFWD3Q6PCD5 774 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 SLC36A4Q6YBV0 504 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 ENOSF1Q7L5Y1 443 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 IRF2BP1Q8IU81 584 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 ADAM32Q8TC27 787 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 ZNF606Q8WXB4 792 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 DDX1Q92499 740 aaKnown RBP14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 MRGPRX1Q96LB2 322 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 SLC2A11Q9BYW1 496 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 STOML2Q9UJZ1 356 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 NAALADL1Q9UQQ1 740 aa14.88□□□□□ -0.03
RTN3P1-201ENST00000536295 NUP205Q92621 2012 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 BECN2A8MW95 431 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 SYNCRIPO60506 623 aaKnown RBP14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 TBL1XO60907 577 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 LATS1O95835 1130 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 IGLV3-27P01718 113 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 FYNP06241 537 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 HLA-FP30511 346 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 ACADSBP45954 432 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 SLC11A2P49281 568 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 ZNF445P59923 1031 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 EIF4HQ15056 248 aaKnown RBP14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 EXOC3L4Q17RC7 722 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 HSP90AA4PQ58FG1 418 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 NUGGCQ68CJ6 796 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 CACUL1Q86Y37 369 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 SYT12Q8IV01 421 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 UNC45BQ8IWX7 931 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 DQX1Q8TE96 717 aaKnown RBP14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 PRDM16Q9HAZ2 1276 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 ABCB8Q9NUT2 735 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 STIM2Q9P246 746 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 APEX2Q9UBZ4 518 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 CYTH4Q9UIA0 394 aa14.87□□□□□ -0.03
RTN3P1-201ENST00000536295 NCOR2Q9Y618 2525 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 E5RJQ4 531 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 CAPN9O14815 690 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 TM4SF5O14894 197 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 NPC1O15118 1278 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 SART1O43290 800 aaKnown RBP14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 ACSL4O60488 711 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 NDUFS2O75306 463 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 CFIP05156 583 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 EPHX1P07099 455 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 ADRB1P08588 477 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 PRKCHP24723 683 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 PON1P27169 355 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 SLC6A4P31645 630 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 RPL34P49207 117 aaKnown RBP14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 ZNF33AQ06730 810 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 DPCR1Q3MIW9 517 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 FAM133BQ5BKY9 247 aaKnown RBP14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 SPDYCQ5MJ68 293 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 PIK3R6Q5UE93 754 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 SERPINA13PQ6UXR4 307 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 CHST9Q7L1S5 443 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 PASD1Q8IV76 773 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 CYB5D2Q8WUJ1 264 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 FCRL2Q96LA5 508 aaPredicted RBP14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 FAM81BQ96LP2 452 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 HSPA12BQ96MM6 686 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 SERPINB11Q96P15 392 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 NUSAP1Q9BXS6 441 aaKnown RBP14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 SLC4A5Q9BY07 1137 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 MKRN2Q9H000 416 aaKnown RBP14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 NUP62CLQ9H1M0 184 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 TMEM9BQ9NQ34 198 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 FSCN3Q9NQT6 498 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 GGA2Q9UJY4 613 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 AJAP1Q9UKB5 411 aaPredicted RBP14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 PILRBQ9UKJ0 227 aa14.86□□□□□ -0.03
RTN3P1-201ENST00000536295 SPTBN2O15020 2390 aa14.85□□□□□ -0.03
RTN3P1-201ENST00000536295 GTPBP10A4D1E9 387 aaKnown RBP14.85□□□□□ -0.03
RTN3P1-201ENST00000536295 PAPSS1O43252 624 aaPredicted RBP14.85□□□□□ -0.03
RTN3P1-201ENST00000536295 TIMM44O43615 452 aa14.85□□□□□ -0.03
RTN3P1-201ENST00000536295 MOCS2O96007 188 aaPredicted RBP14.85□□□□□ -0.03
RTN3P1-201ENST00000536295 PABPC1P11940 636 aaKnown RBP14.85□□□□□ -0.03
RTN3P1-201ENST00000536295 HLA-EP13747 358 aa14.85□□□□□ -0.03
RTN3P1-201ENST00000536295 ANP32AP39687 249 aaKnown RBP14.85□□□□□ -0.03
RTN3P1-201ENST00000536295 MAPK8P45983 427 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms