RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 PLK2Q9NYY3 685 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 SFMBT1Q9UHJ3 866 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 CDV3Q9UKY7 258 aaKnown RBP9.24□□□□□ -0.93
CHD4-204ENST00000535810 HBS1LQ9Y450 684 aaKnown RBP9.24□□□□□ -0.93
CHD4-204ENST00000535810 EML5Q05BV3 1969 aa9.24□□□□□ -0.93
CHD4-204ENST00000535810 PRRT4C9JH25 899 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 DCLK1O15075 740 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 LRP3O75074 770 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 FBXO21O94952 628 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 LETM1O95202 739 aaPredicted RBP9.23□□□□□ -0.93
CHD4-204ENST00000535810 LTFP02788 710 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 CISD3P0C7P0 127 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 GNA15P30679 374 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 CHKAP35790 457 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 GCGRP47871 477 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 DGKGP49619 791 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 SPEM2Q0P670 501 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 ARHGAP44Q17R89 818 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 HSP90AA4PQ58FG1 418 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 CT47A1Q5JQC4 288 aaPredicted RBP9.23□□□□□ -0.93
CHD4-204ENST00000535810 MIIPQ5JXC2 388 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 EOGTQ5NDL2 527 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 EGFLAMQ63HQ2 1017 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 MSANTD2Q6P1R3 559 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 RBM43Q6ZSC3 357 aaKnown RBP9.23□□□□□ -0.93
CHD4-204ENST00000535810 CACNA2D4Q7Z3S7 1137 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 FAM114A1Q8IWE2 563 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 CPXM2Q8N436 756 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 ZNF513Q8N8E2 541 aaPredicted RBP9.23□□□□□ -0.93
CHD4-204ENST00000535810 ZNF606Q8WXB4 792 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 ZC3H10Q96K80 434 aaKnown RBP9.23□□□□□ -0.93
CHD4-204ENST00000535810 TUBGCP2Q9BSJ2 902 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 TPSD1Q9BZJ3 242 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 NDST4Q9H3R1 872 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 SIX2Q9NPC8 291 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 ST7Q9NRC1 585 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 CYTH4Q9UIA0 394 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 FBXO10Q9UK96 956 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 AJAP1Q9UKB5 411 aaPredicted RBP9.23□□□□□ -0.93
CHD4-204ENST00000535810 USP18Q9UMW8 372 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 STARD13Q9Y3M8 1113 aa9.23□□□□□ -0.93
CHD4-204ENST00000535810 TCRBV21S2A2A0A5A6 115 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 DCDC2BA2VCK2 349 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 KCNJ18B7U540 433 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 GFRA2O00451 464 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 PAPSS1O43252 624 aaPredicted RBP9.22□□□□□ -0.93
CHD4-204ENST00000535810 THAP12O43422 761 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 MED7O43513 233 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 EPN2O95208 641 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 LATS1O95835 1130 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 IGLV3-27P01718 113 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 FYNP06241 537 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 USP8P40818 1118 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 HARS2P49590 506 aaKnown RBP9.22□□□□□ -0.93
CHD4-204ENST00000535810 PDCLQ13371 301 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 KCNJ12Q14500 433 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 PLK5Q496M5 336 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 VWA3BQ502W6 1294 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 DPY19L2P1Q6NXN4 242 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 TRMT11Q7Z4G4 463 aaKnown RBP9.22□□□□□ -0.93
CHD4-204ENST00000535810 SCUBE3Q8IX30 993 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 OLIG1Q8TAK6 271 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 DQX1Q8TE96 717 aaKnown RBP9.22□□□□□ -0.93
CHD4-204ENST00000535810 STK32AQ8WU08 396 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 GOLGA1Q92805 767 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 LOXL4Q96JB6 756 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 ACOX2Q99424 681 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 GABRG3Q99928 467 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 MIS12Q9H081 205 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 SAMSN1Q9NSI8 373 aaKnown RBP9.22□□□□□ -0.93
CHD4-204ENST00000535810 SEMA4GQ9NTN9 838 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 STOML2Q9UJZ1 356 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 RALYQ9UKM9 306 aaKnown RBP9.22□□□□□ -0.93
CHD4-204ENST00000535810 CLEC4EQ9ULY5 219 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 SLC27A6Q9Y2P4 619 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 NFE2L3Q9Y4A8 694 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 ABCA7Q8IZY2 2146 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 ZFYVE26Q68DK2 2539 aa9.22□□□□□ -0.93
CHD4-204ENST00000535810 CNOT1A5YKK6 2376 aaKnown RBP9.21□□□□□ -0.93
CHD4-204ENST00000535810 A0A1W2PQF6 199 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 E5RJQ4 531 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 SART1O43290 800 aaKnown RBP9.21□□□□□ -0.94
CHD4-204ENST00000535810 ALDH1A2O94788 518 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 CYBBP04839 570 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 PNMA6AP0CW24 399 aaPredicted RBP9.21□□□□□ -0.94
CHD4-204ENST00000535810 NCAM1P13591 858 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 HOXB2P14652 356 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 BCKDHBP21953 392 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 EEF1GP26641 437 aaKnown RBP9.21□□□□□ -0.94
CHD4-204ENST00000535810 HOXD9P28356 352 aaPredicted RBP9.21□□□□□ -0.94
CHD4-204ENST00000535810 NTSR1P30989 418 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 WASP42768 502 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 ACADSBP45954 432 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 ZNF445P59923 1031 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 CSRP2Q16527 193 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 GEN1Q17RS7 908 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 USP39Q53GS9 565 aaKnown RBP9.21□□□□□ -0.94
CHD4-204ENST00000535810 TCP11X2Q5H9J9 407 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 ADGRF1Q5T601 910 aa9.21□□□□□ -0.94
CHD4-204ENST00000535810 ANKS1BQ7Z6G8 1248 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms