RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 NADSYN1Q6IA69 706 aa23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 SFTPA1Q8IWL2 248 aa23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 ARHGEF4Q9NR80 690 aa23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 METTL5Q9NRN9 209 aaKnown RBP23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 RRN3Q9NYV6 651 aa23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 PLK2Q9NYY3 685 aa23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 CALCOCO1Q9P1Z2 691 aa23.62■■□□□ 1.37
SFSWAP-204ENST00000535399 A0A0A0MRY4 1105 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 GOLGA6L7A0A1B0GV03 622 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 K7EQS6 105 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 TRIM24O15164 1050 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 KAT7O95251 611 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 CALB1P05937 261 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 CASP14P31944 242 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 GBP1P32455 592 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 KDSRQ06136 332 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 FBXO43Q4G163 708 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 MAMSTRQ6ZN01 415 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 MAML2Q8IZL2 1156 aaPredicted RBP23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 XPO6Q96QU8 1125 aaKnown RBP23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 DNAJC17Q9NVM6 304 aaKnown RBP23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 DEC1Q9P2X7 70 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 XPO7Q9UIA9 1087 aaKnown RBP23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 FBXO10Q9UK96 956 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 MIA3Q5JRA6 1907 aa23.61■■□□□ 1.37
SFSWAP-204ENST00000535399 MYOFQ9NZM1 2061 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 WDFY4Q6ZS81 3184 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 SYNJ2BP-COX16A0A087WUM0 186 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 TCRBV5S1A1TA0A578 114 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 KCNU1A8MYU2 1149 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 M0QYT0 321 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 TSPAN3O60637 253 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 RNF40O75150 1001 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 MOCS2O96007 188 aaPredicted RBP23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 APOEP02649 317 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 CYBBP04839 570 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 APODP05090 189 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 CISD3P0C7P0 127 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 CHRM1P11229 460 aaPredicted RBP23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 SLC6A4P31645 630 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 GRIA2P42262 883 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 NME3Q13232 169 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 ANGPT1Q15389 498 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 PKN3Q6P5Z2 889 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 MCOLN2Q8IZK6 566 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 SPEM1Q8N4L4 309 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 PGAP3Q96FM1 320 aaPredicted RBP23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.6■■□□□ 1.375e-6■□□□□ 9.7
SFSWAP-204ENST00000535399 COX16Q9P0S2 106 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 STAP1Q9ULZ2 295 aa23.6■■□□□ 1.37
SFSWAP-204ENST00000535399 ANTXRLA6NF34 631 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 GJB6O95452 261 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 CCR1P32246 355 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 SULT1E1P49888 294 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 SGSHP51688 502 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 TRIM14Q14142 442 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 SLC25A52Q3SY17 297 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 MPPE1Q53F39 396 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 PIK3R6Q5UE93 754 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 RFWD3Q6PCD5 774 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 BNIPLQ7Z465 357 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 EMC1Q8N766 993 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 JOSD2Q8TAC2 188 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 DDI1Q8WTU0 396 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 MYEOVQ96EZ4 313 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 BTN2A3PQ96KV6 586 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 TBCBQ99426 244 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 PRMT8Q9NR22 394 aaPredicted RBP23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 PIGVQ9NUD9 493 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 C2orf42Q9NWW7 574 aa23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 ARIH1Q9Y4X5 557 aaPredicted RBP23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 BZW2Q9Y6E2 419 aaKnown RBP23.59■■□□□ 1.37
SFSWAP-204ENST00000535399 LAMTOR5O43504 91 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 SERPING1P05155 500 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 SLC2A3P11169 496 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 GZMAP12544 262 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 HOXD9P28356 352 aaPredicted RBP23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 HNRNPH3P31942 346 aaKnown RBP23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 PTPN5P54829 565 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 PPP2R5DQ14738 602 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 TDRD12Q587J7 1177 aaKnown RBP23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 GRAMD4Q6IC98 578 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 PPP1R2P3Q6NXS1 205 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 TERB1Q8NA31 727 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 C3orf20Q8ND61 904 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 TMA16Q96EY4 203 aaKnown RBP23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 CFAP57Q96MR6 1250 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 IRX2Q9BZI1 471 aaPredicted RBP23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 CLEC4EQ9ULY5 219 aa23.58■■□□□ 1.37
SFSWAP-204ENST00000535399 C2CD4BA6NLJ0 364 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 TMCO5BA8MYB1 307 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 CHURC1-FNTBB4DL54 471 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 PLEKP08567 350 aaPredicted RBP23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 KRT3P12035 628 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 DGKGP49619 791 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 CXCR3P49682 368 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 PREPLQ4J6C6 727 aaPredicted RBP23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 RNF43Q68DV7 783 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 DNAAF5Q86Y56 855 aa23.57■■□□□ 1.36
SFSWAP-204ENST00000535399 ATP6V0D2Q8N8Y2 350 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms