RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 UFL1O94874 794 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 RHOBTB3O94955 611 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 KRT18P05783 430 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 SRGNP10124 158 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 PRKAR1AP10644 381 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 EEF2P13639 858 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 BPIP17213 487 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 GAP43P17677 238 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 GNAZP19086 355 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 ACAT1P24752 427 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 AOAHP28039 575 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 PKLRP30613 574 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 CASP14P31944 242 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 EVI2BP34910 448 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 CTNNA1P35221 906 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 PTDSS1P48651 473 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 TUFMP49411 452 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 NOP14P78316 857 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 HTRA3P83110 453 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 KRT17Q04695 432 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 DLX2Q07687 328 aaPredicted RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 SCRN3Q0VDG4 424 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 DBPQ10586 325 aaPredicted RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 SMARCB1Q12824 385 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 PTK2BQ14289 1009 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 OASLQ15646 514 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 CLUL1Q15846 466 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 ARHGAP44Q17R89 818 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 GEN1Q17RS7 908 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 PARP6Q2NL67 630 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 P3H1Q32P28 736 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 CNPY1Q3B7I2 92 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 LIN52Q52LA3 116 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 ZC2HC1CQ53FD0 456 aaPredicted RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 VWA5B1Q5TIE3 1220 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 TMEM154Q6P9G4 183 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 KDELC1Q6UW63 502 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 KIF6Q6ZMV9 814 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 STOX1Q6ZVD7 989 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 RTL10Q7L3V2 364 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 PATL1Q86TB9 770 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 NLRP14Q86W24 1093 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 LONP2Q86WA8 852 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 KIF18BQ86Y91 864 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 CDH26Q8IXH8 852 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 ST13P4Q8IZP2 240 aaPredicted RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 CPSF7Q8N684 471 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 ALLCQ8N6M5 410 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 EIF1ADQ8N9N8 165 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 MINDY2Q8NBR6 621 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 ASB15Q8WXK1 588 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 FATE1Q969F0 183 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 ZBTB8AQ96BR9 441 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 CFAP57Q96MR6 1250 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 XPO6Q96QU8 1125 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 CCT8L2Q96SF2 557 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 PPP1R16BQ96T49 567 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 MYD88Q99836 296 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 C11orf84Q9BUA3 381 aaPredicted RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 SELENOOQ9BVL4 669 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 RHOBTB2Q9BYZ6 727 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 OR51B5Q9H339 312 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 KCTD10Q9H3F6 313 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 LRRC19Q9H756 370 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 C10orf88Q9H8K7 445 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 DDX43Q9NXZ2 648 aaKnown RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 HECAQ9UBI9 543 aaPredicted RBP5.73□□□□□ -1.49
CD44-236ENST00000533222 BAIAP2L1Q9UHR4 511 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 STON1Q9Y6Q2 735 aa5.73□□□□□ -1.49
CD44-236ENST00000533222 ABCC8Q09428 1581 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 ATP7BP35670 1465 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 RPRD2Q5VT52 1461 aaKnown RBP5.72□□□□□ -1.49
CD44-236ENST00000533222 ARAP1Q96P48 1450 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 CPDO75976 1380 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 LOC100653049A0A140TA62 436 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 A0A1B0GTL3 188 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 A0A1B0GVL5 298 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 ANO9A1A5B4 782 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 GOLGA8IPA6NC78 632 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 USP27XA6NNY8 438 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 PFDN6O15212 129 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 FOXP2O15409 715 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 ZW10O43264 779 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 ECE2O60344 883 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 HSF2BPO75031 334 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 ATP5HO75947 161 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 KRT34O76011 436 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 EYA4O95677 639 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 MPIG6BO95866 241 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 KRT3P12035 628 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 SLC5A1P13866 664 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 GLULP15104 373 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 PDGFRAP16234 1089 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 HSPA6P17066 643 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 CTNNA2P26232 953 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 PPARGP37231 505 aaPredicted RBP5.72□□□□□ -1.49
CD44-236ENST00000533222 GLRBP48167 497 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 GSSP48637 474 aa5.72□□□□□ -1.49
CD44-236ENST00000533222 HARS2P49590 506 aaKnown RBP5.72□□□□□ -1.49
CD44-236ENST00000533222 CDKN1CP49918 316 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms